MXO52618.5prime Sequence
762 bp (726 high quality bases) assembled on 2007-04-02
> MXO52618.5prime
CAGTCGACATGGAGAGTCCTGTAGCGCAACAAGAGGACACAGCCAAGCCA
GACGAAGATCTGCCCAACGAGCAGGTTACACAGTTCCTTCGCCAACTGGC
CAGCCAGCTGTGGCCAGAGCTGGGCGCCAATCCGGAACTGCGTCTGGAAA
GGGCGAGTGCCAAGGGCGACAACTATTTGGGCGTGGTGTGGCGCCTACAG
GCGGCATCCGATTCGAAACGCAGCCTGGTGGTTAAACTGCCGCCACAGAA
TCGCGTGCGCCGCAAGCAATTCTTTGCACGACCATGTTTCCTGCGCGAGA
CGGCAGCATATGAGGTCTTTCTGCCGCTGACTGCGTTAATTCAGGATAAG
TGGAAGATAATCGGAGATGATCGTTTCTTGCAGCCCCCGCTCTGTTTCGG
AACTCGCCAGGATGAGCCCAACGAGTGCATCGTGCTGGAGGATCTGTCTT
GTGCCGGCTTCTCACTGCACAATCGCTTTCTCGACCTATCCGTCGAGCAT
GTGCGTCGCGTAATGCTCACCTATGCCAAATTACATGCTATATCATTGGC
CGGGAAACGGCAGTTGCCCGAGAAAATGCAACAACTGCAGCAGCTGGTGG
ATATCTTTGAGCAGCGACGCGATGATCATGCCTTGGGGGTCTACTTCGAG
AATCTGAAGGAAAGCGCCCTATCCGCACTGCTCGCACCGGCGGATGATGC
ATACAGAGTTCGTCTGGAGGCGTACTTCGCCAGAAGATAGAACTTAGAGC
TGCTGCTGCCTT
MXO52618.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1561-PA | 1293 | CG1561-RA | 1..754 | 9..762 | 3520 | 98.6 | Plus |
| CG1561-PB | 1908 | CG1561-RB | 616..1369 | 9..762 | 3520 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1561-RB | 2160 | CG1561-RB | 631..1384 | 9..762 | 3620 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11582792..11583545 | 762..9 | 3620 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:31:25 has no hits.
MXO52618.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:31 Download gff for
MXO52618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-PB | 608..1369 | 1..762 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:27:07 Download gff for
MXO52618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 623..1384 | 1..762 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:15:08 Download gff for
MXO52618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 623..1384 | 1..762 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:15:08 Download gff for
MXO52618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11582792..11583549 | 1..762 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:27:07 Download gff for
MXO52618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11476825..11477582 | 1..762 | 98 | | Minus |
