MXO52619.5prime Sequence
687 bp (584 high quality bases) assembled on 2007-04-02
> MXO52619.5prime
CAGTCGACATGGGCTTTGACGAGACGCGTGAGCCCACCGGCGGCAGACTG
CGACTGCAGGACATTCCGGCCCTCACCCAGGACCACTGCCGCATGCGGGA
TCCGGCGGAGGTGGAGCGCATCATCAACGAGTTCGTCATCGGCGGACCAG
AGCGCATGCAAATCGTCTCCGACTTCGACTACACCATCACCAAGCAGCGC
ACGGAGGATGGAGGAGCAGTGCCCTCCAGTTTCGGGATCTTCAACGCCTG
CCAGTCGCTGCCGGAAAACTTTAAGGCGGAGACGGACAAGCTGTACCACA
AGTACCGGCCCATTGAGATCGATCCCCACATGCCCATCGCCGAGAAGGTG
CAGTACATGATCGAGTGGTGGACCTTGTCTGGCGAACTGACCAGCGGCTT
CCCCTTCGACCAGTCGGAAATAGATCAGATAGCCAGCAAGTACACGCATG
CGCTACGTGACCGCACCCACGAGTTCTTTGCGGACCTCCAGCGCTTGGGC
ATTCCCACGCTTGTCTTCTCCGCCGGGCTGGGCAACTCGGTGGTCTCGGT
TCTTCGCCAGGCCAACGTTTTGCATCCGAACGTGAAGGAAGTCTCGAACT
TTCTTCAGTTCCGGGATGGCCTTCTAGATGGCTTTCAGCACCCGATGATA
CACACCTTCAACAAGAACGAGACGGTGCTAAATGAGA
MXO52619.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3362-PA | 960 | CG3362-RA | 1..679 | 9..687 | 3245 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cN-IIIB-RA | 1530 | CG3362-RA | 375..1053 | 9..687 | 3305 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24195872..24196550 | 9..687 | 3305 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:17:42 has no hits.
MXO52619.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:31 Download gff for
MXO52619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-PA | 1..678 | 9..686 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:16 Download gff for
MXO52619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-RA | 366..1052 | 1..686 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:05 Download gff for
MXO52619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cN-IIIB-RA | 366..1052 | 1..686 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:05 Download gff for
MXO52619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24195863..24196549 | 1..686 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:16 Download gff for
MXO52619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20083386..20084072 | 1..686 | 98 | | Plus |
