MXO52621.5prime Sequence
377 bp (376 high quality bases) assembled on 2007-04-02
> MXO52621.5prime
CAGTCGACATGCCCGGAGCCGGCCCCTTCAAGTTATTCATCGGGAATCTT
GACGAGAAGACACAGGCCACCGAGCTGCGTGCACTGTTCGAGAAGTACGG
TACCGTCGTCGAGTGCGACGTGGTGAAGAACTATGGCTTCGTTCACATGG
AGACGGAGCAGCAGGGTCGCGATGCCATACAGAATCTGAACGGTTATACG
CTGAACGAGTTCGCCATCAAGGTGGAGGCGGCCAAGAGCCGGCGGGCGCC
CAATACGCCGACCACGAAAATCTTCGTGGGAAATCTAACGGACAAGACGC
GGGCGCCGGAGGTGCGGGAACTGTTTCAGAAATACGGCACCGTCGTCGAA
TGCGACATTGTGCGCAACTATGGTTTT
MXO52621.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8597-PB | 1059 | lark-RB | 1..369 | 9..377 | 1795 | 99.4 | Plus |
| CG8597-PA | 1059 | lark-RA | 1..369 | 9..377 | 1795 | 99.4 | Plus |
| CG8597-PC | 1059 | lark-RC | 1..369 | 9..377 | 1795 | 99.4 | Plus |
| CG8597-PE | 1059 | lark-RE | 1..369 | 9..377 | 1795 | 99.4 | Plus |
| CG8597-PD | 1059 | lark-RD | 1..369 | 9..377 | 1795 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lark-RD | 1758 | CG8597-RD | 276..645 | 8..377 | 1820 | 99.5 | Plus |
| lark-RE | 2087 | CG8597-RE | 605..974 | 8..377 | 1820 | 99.5 | Plus |
| lark-RC | 1784 | CG8597-RC | 302..671 | 8..377 | 1820 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7340068..7340437 | 8..377 | 1820 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:05:54 has no hits.
MXO52621.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:32 Download gff for
MXO52621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8597-PD | 1..369 | 9..377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:56 Download gff for
MXO52621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lark-RC | 295..671 | 1..377 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:40 Download gff for
MXO52621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lark-RC | 295..671 | 1..377 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:40 Download gff for
MXO52621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7340061..7340437 | 1..377 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:56 Download gff for
MXO52621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7333161..7333537 | 1..377 | 98 | | Plus |
