MXO52622.5prime Sequence
676 bp (635 high quality bases) assembled on 2007-04-02
> MXO52622.5prime
CAGTCGACATGACTAAAGACAGATTCGCCGCTCTCCATGCCGCCCAATCC
GATGACGAGGAGGAGACGGAGGTGGCCGTCAATGTGGATGGCCATGATTC
CTACATGGACGACTTCTTCGCCCAGGTGGAGGAGATCCGCGGGATGATCG
ACAAGGTGCAGGATAACGTCGAGGAGGTAAAGAAGAAGCACTCGGCCATC
CTGTCCGCCCCACAAACGGACGAGAAGACCAAGCAAGAGCTGGAGGATCT
GATGGCCGACATCAAGAAGAATGCCAATCGCGTTCGCGGCAAGCTCAAGG
GCATCGAGCAGAACATCGAGCAGGAAGAGCAGCAGAATAAGTCGTCGGCG
GATCTGAGAATTCGGAAGACGCAGCATTTTTCTTTCCCCCGCAAATTCGT
CGAAGTGATGACCGAAAACAATCGCACGCAGACCGACTACCGAGAGCGCT
GCAAGGGAAGGATACAGCGTCAACTGGAGATTACCGGACGACCGACCAAC
GACGATGAGCTGGAGAAGATGCTGGAGGAGGGCAACTCGTCTGTGTTCAC
GCAGGGCATCATCATGGAGACGCAGCAGGCCAAACAGACGCTGGCGGACA
TTGAGGCCCGCCACCAGGACATCATGAAGCTGGAGACATCGATCAAGGAG
CTGCACGACATGTTCATGGACATGGC
MXO52622.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31136-PA | 876 | Syx1A-RA | 1..368 | 9..376 | 1815 | 99.7 | Plus |
| CG31136-PA | 876 | Syx1A-RA | 385..668 | 393..676 | 1370 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx1A-RB | 2639 | CG31136-RB | 1321..1988 | 9..676 | 3160 | 98.2 | Plus |
| Syx1A-RA | 2385 | CG31136-RA | 1321..1988 | 9..676 | 3160 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24103776..24104443 | 676..9 | 3160 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:14 has no hits.
MXO52622.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:32 Download gff for
MXO52622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31136-PA | 1..668 | 9..676 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:02 Download gff for
MXO52622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx1A-RA | 1321..1988 | 9..676 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:19 Download gff for
MXO52622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx1A-RA | 1321..1988 | 9..676 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:19 Download gff for
MXO52622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24103776..24104443 | 9..676 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:02 Download gff for
MXO52622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19929498..19930165 | 9..676 | 98 | | Minus |
