MXO52628.5prime Sequence
843 bp (802 high quality bases) assembled on 2007-04-02
> MXO52628.5prime
CCCCTAAAAGGACGTTATCAGTCGACATGCCGCACAACAACCCCCTGAGG
GCCGGGGATGATCAGTTGGGACCGCCAAAGGCGGACTTCAGTGCTCCGCC
ACCGTACGAGGCGAACGCTGGCCATGGCCAGCAGGTAGCACTGCCGGCTC
AGATGCCACCGCTGGCCTTGGCCACACCCGATCCCAGTCAGATCCCGATA
CAGATGCAAGTGCAGCTGCCGAGCCAGGCGGACCTTATGAATGCACAACT
GCCGCCAGAAATACACGGGAAGTTGCCCACGTACGAGGAGGTTCAAATGG
AAAAGTCGCTGAACGGAGAGCTGCCGCCCGCCTTTTTGACTTTACCCTCC
TCGCAGCAGCTACCGCCGCCGCCGAATCCGCTACTGCCGCCTATTTTTCT
GCCCGCTGGAGCCGCTGCTGTGCGATCTGCCCAGCCGGCACTCACGTTCA
TCGCCATCGATGCCAGCGATCCGGAAAATAGTCTGTCCACCACCGACAAC
TTGCTCGGCACGGACATCATGTTCATCACGGCCTTCATTGTGGCCTTTTT
GTTTAACTGGATCGGCTTCCTGATGCTCACCTGTTTCTGTCACACAATCG
CCGCCCGATATGGAGCATTGTCGGGATTCGGATTGTCGCTGGCTAAATGG
ACGCTGATCGTGAAGCACTCGACGGACTTGGCCTCGCACGAAAACTCCTG
GCTCTGGTGGCTGATCTGTGCCTTTGGCTTCCTGATCAGCATACGCGCTT
TAATACAGTATGTCAGCATCAAGCGATCGTGGCGCCTCCTTTCCGCCTCT
GCCCAGGAACGGCTGCTATTCTTTTACGCAAGCTTTCTAGACC
MXO52628.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32177-PA | 804 | CG32177-RA | 381..801 | 407..827 | 2105 | 100 | Plus |
| CG32177-PA | 804 | CG32177-RA | 26..365 | 52..391 | 1675 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 2094 | CG32177-RA | 291..1092 | 26..827 | 3785 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17648444..17649245 | 827..26 | 3785 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:31:28 has no hits.
MXO52628.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:34 Download gff for
MXO52628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-PA | 1..804 | 27..828 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:27:10 Download gff for
MXO52628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1092 | 20..827 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:15:11 Download gff for
MXO52628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1092 | 20..827 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:15:11 Download gff for
MXO52628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17648444..17649252 | 15..827 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:27:10 Download gff for
MXO52628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17641544..17642352 | 15..827 | 97 | | Minus |
