MXO52638.5prime Sequence
700 bp (661 high quality bases) assembled on 2007-04-02
> MXO52638.5prime
CAGTCGACATGACGTTGCCCGAGTCCTTTGGCTGCACCTTCATCGCCTTC
GGACCGCCCTTCGCCTTGTTCGTCTTCACCATCGCCAATGATCCAGTGCG
GATCATCATTCTGATTGCGGCGGCATTCTTCTGGCTGCTTTCCCTGCTGA
TCTCTTCCCTGTGGTATGCCCTGATTCCGCTGAAGGAGTTCCTGGCATTT
GGCGTGGTCTTCTCGGTGTGCTTCCAGGAAGCCTTCCGGTACATCATCTA
CCGGATACTGCGCAGCACGGAGCAGGGATTGCACGCCGTGGCGGAGGACA
CGCGAGTGACGGACAACAAGCACATCCTGGCCTATGTCTCCGGCTTGGGA
TTCGGCATTATATCCGGGATGTTTGCACTGGTCAATGTGCTGGCTGATAT
GAGTGGTCCCGGCACCATGGGCTTGAAGGGCGGAACTGAGCTATTCTTCG
TCACCTCGGCTGCCCAGGCGTTGTCGATTATCCTGCTGCACACCTTCTGG
AGCGTTATTTTCTTCAACGCATTCGACACAAACAACTATATCCACATAGG
CTATGTGGTTTTCAGCCACCTGTTCGTCTCCCTGATAACTCTGCTCAATG
CCAATGAGCTTTACACGACCACTCTGCTGATAAACTACTTGGTCACCATA
CTTACGGGAGTCCTGGCCTTCCGGGTGGCTGGAGGACATCTCGCAGTTTC
MXO52638.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2855-PA | 717 | aph-1-RA | 1..678 | 9..686 | 3365 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aph-1-RB | 990 | CG2855-RB | 83..775 | 9..700 | 3425 | 99.7 | Plus |
| aph-1-RA | 863 | CG2855-RA | 83..775 | 9..700 | 3425 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2766315..2766707 | 9..401 | 1950 | 99.7 | Plus |
| 2L | 23513712 | 2L | 2766766..2767066 | 401..700 | 1455 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:21:06 has no hits.
MXO52638.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:37 Download gff for
MXO52638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2855-PA | 1..693 | 9..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:29:05 Download gff for
MXO52638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aph-1-RA | 75..775 | 1..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:45 Download gff for
MXO52638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aph-1-RA | 75..775 | 1..700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:45 Download gff for
MXO52638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2766307..2766707 | 1..401 | 98 | -> | Plus |
| 2L | 2766767..2767066 | 402..700 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:29:05 Download gff for
MXO52638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2766307..2766707 | 1..401 | 98 | -> | Plus |
| arm_2L | 2766767..2767066 | 402..700 | 99 | | Plus |
