MXO52643.5prime Sequence
892 bp (808 high quality bases) assembled on 2007-04-02
> MXO52643.5prime
CAGTCGACATGATACCCTGGATGCGGGAGAAGTTCAACGAGAAACGGGCC
AAGTGGTTGGCGCGTAGCAAGCGCAGCGGTGGTTCTCCGGCTGACGAAAG
CCCTCGGAGCAGCAGTCATAGCCACAGCCAGCGGACAGACGCCAGCGATG
CGGAGAGCCTGAGCGGATCCTCGTTGAATGTCCACACGGCGGAATCTGAA
ACGCAGACGGATGGCGGGATATCCGCTTCCAATTCGCGGCCCCTTGTGGG
CGGGGGCAGTTGCGTCCTAAGGACTCCATCGCCCGCTCGCCGACGTCGCA
TTCACCTTGAGCTACAGCTGCAGCGACGAGAGGAACGTGCTGAGCATCAG
AAGGTGGTGCCACAGGACTCGCCCACGCCCACTCACCAACAGCAGGCTAA
TGCGAAATCAGCCCATACAAATCGCCCAGGTAGCTCTACTTCTGGCGAGG
CAGACGATGCCAGCAGGCCAGGTGAATCTATCCTGGTGCGGGTAATCTGC
CCCAGCTCTCGGGTTCTTATCTTCAAAACGGACGTTAATAAGCGCCTAAA
CGAGCTGAAGAGTGAGGTGATTCTGGAACTGAGCGACGATCCCGACTCCA
TCCAGCTATTTGCCCCAGATGTGCGGCATCTTAATCCGCGATACCGTCTC
TATCGGGCGGAATACTTCGGCGGCGAGCTTAACGAGGGCGACACGCTGGC
CCAGCTAAAAGTTCGCAACAATGAGACTTTCATACTCTCCCCACGACGCA
ATACTCTGCCGCAGACTGTTTCACGGATACGTGAGGTTCCTGGCCCAAAT
GAGCAGCTGGTGGAGAGCGCCACCCGATACGTGCCCGTCAATTGCAACCA
GCTGCCCACCATCGATATTAATGAAATCTTTCAGCAGTCGAA
MXO52643.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11025-PA | 1674 | isopeptidase-T-3-RA | 1..884 | 9..892 | 4420 | 100 | Plus |
CG11025-PB | 1308 | isopeptidase-T-3-RB | 30..518 | 404..892 | 2445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
isopeptidase-T-3-RA | 2479 | CG11025-RA | 138..1021 | 9..892 | 4420 | 100 | Plus |
isopeptidase-T-3-RC | 2491 | CG11025-RC | 138..1033 | 9..892 | 4290 | 98.7 | Plus |
isopeptidase-T-3-RB | 1778 | CG11025-RB | 134..622 | 404..892 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19671361..19671849 | 404..892 | 2445 | 100 | Plus |
2R | 25286936 | 2R | 19670755..19671150 | 9..404 | 1980 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:18:00 has no hits.
MXO52643.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:39 Download gff for
MXO52643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11025-PA | 1..882 | 9..890 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:28 Download gff for
MXO52643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
isopeptidase-T-3-RA | 138..1021 | 9..892 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:14 Download gff for
MXO52643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
isopeptidase-T-3-RA | 138..1021 | 9..892 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:14 Download gff for
MXO52643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19670755..19671149 | 9..403 | 100 | -> | Plus |
2R | 19671361..19671849 | 404..892 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:28 Download gff for
MXO52643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15558866..15559354 | 404..892 | 100 | | Plus |
arm_2R | 15558260..15558654 | 9..403 | 100 | -> | Plus |