Clone MXO52643 Report

Search the DGRC for MXO52643

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:526
Well:43
Vector:pMK33-CTAP-BD
Associated Gene/Transcriptisopeptidase-T-3-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO52643.5prime Sequence

892 bp (808 high quality bases) assembled on 2007-04-02

> MXO52643.5prime
CAGTCGACATGATACCCTGGATGCGGGAGAAGTTCAACGAGAAACGGGCC
AAGTGGTTGGCGCGTAGCAAGCGCAGCGGTGGTTCTCCGGCTGACGAAAG
CCCTCGGAGCAGCAGTCATAGCCACAGCCAGCGGACAGACGCCAGCGATG
CGGAGAGCCTGAGCGGATCCTCGTTGAATGTCCACACGGCGGAATCTGAA
ACGCAGACGGATGGCGGGATATCCGCTTCCAATTCGCGGCCCCTTGTGGG
CGGGGGCAGTTGCGTCCTAAGGACTCCATCGCCCGCTCGCCGACGTCGCA
TTCACCTTGAGCTACAGCTGCAGCGACGAGAGGAACGTGCTGAGCATCAG
AAGGTGGTGCCACAGGACTCGCCCACGCCCACTCACCAACAGCAGGCTAA
TGCGAAATCAGCCCATACAAATCGCCCAGGTAGCTCTACTTCTGGCGAGG
CAGACGATGCCAGCAGGCCAGGTGAATCTATCCTGGTGCGGGTAATCTGC
CCCAGCTCTCGGGTTCTTATCTTCAAAACGGACGTTAATAAGCGCCTAAA
CGAGCTGAAGAGTGAGGTGATTCTGGAACTGAGCGACGATCCCGACTCCA
TCCAGCTATTTGCCCCAGATGTGCGGCATCTTAATCCGCGATACCGTCTC
TATCGGGCGGAATACTTCGGCGGCGAGCTTAACGAGGGCGACACGCTGGC
CCAGCTAAAAGTTCGCAACAATGAGACTTTCATACTCTCCCCACGACGCA
ATACTCTGCCGCAGACTGTTTCACGGATACGTGAGGTTCCTGGCCCAAAT
GAGCAGCTGGTGGAGAGCGCCACCCGATACGTGCCCGTCAATTGCAACCA
GCTGCCCACCATCGATATTAATGAAATCTTTCAGCAGTCGAA

MXO52643.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11025-PA 1674 isopeptidase-T-3-RA 1..884 9..892 4420 100 Plus
CG11025-PB 1308 isopeptidase-T-3-RB 30..518 404..892 2445 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:01
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-RA 2479 CG11025-RA 138..1021 9..892 4420 100 Plus
isopeptidase-T-3-RC 2491 CG11025-RC 138..1033 9..892 4290 98.7 Plus
isopeptidase-T-3-RB 1778 CG11025-RB 134..622 404..892 2445 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19671361..19671849 404..892 2445 100 Plus
2R 25286936 2R 19670755..19671150 9..404 1980 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:18:00 has no hits.

MXO52643.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:39 Download gff for MXO52643.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11025-PA 1..882 9..890 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:28 Download gff for MXO52643.5prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 138..1021 9..892 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:14 Download gff for MXO52643.5prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 138..1021 9..892 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:14 Download gff for MXO52643.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19670755..19671149 9..403 100 -> Plus
2R 19671361..19671849 404..892 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:28 Download gff for MXO52643.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15558866..15559354 404..892 100   Plus
arm_2R 15558260..15558654 9..403 100 -> Plus