MXO52647.5prime Sequence
863 bp (862 high quality bases) assembled on 2007-04-02
> MXO52647.5prime
CCCCTAAAGCGAAGTTATCAGTCGACATGGACAGCAGGGAGGCGAACGAG
GTGTACGATGACATGAACCTGTACATCGCACCGCAGAGCTTCATCATCGA
GCCGAATGGAGGAGATGCCTTGCTGGTCATCGGGCGCCACGACAAAGTCA
CCAGGGTTCAGCCAGCGAGCGGAGGTCTTGTGGCCAACCTTCGCCCCACC
AGGAGGATTTGTGGTGTGCTGGGAACCATTCACCTACTGAGCTGCGACTA
CCTTCTGGTGGCGACCCACCGCCTCTTCGTGGGCGTGCTCAATGGCGCAG
TTGTGTGGAGATTAGCGGGCTATGACATCATACCTTACATTCCGAATTCC
TTCCAGCGCAAGGAGAACGAAAACTACTTGCGACTGCTACGCTTTATTCT
TCCCCCCAAGTTCTTTTACTTCTCCTACCGCTACAACCTTACCAATTCGC
TGCAGCGACAGCGGGAGGTGGCACAATCGCGGCCTGAAGTATCCGGGTTG
CTCCAGCGCGCTGAGCAGCGATTCGTTTGGAATGGCTATGTGCTGCGGCA
GTTCAACTGCGATAAGATGGAGAAGTTCCAGCTGCCACTCGTCCTGGGCT
TCGTGTCTATCAACCAGGTGCAGATCAACGGGCAGACATTCTTCTGGAGC
ATCATCACCAGGCGTTCCGTGCAGCGGGCGGGCACACGGCTCTTCTGCCG
AGGCAGCGACGAGCAGGGCCATGTTGCGAACTTCGTAGAGACCGAGCAAA
TAGTGGAGTTCAACGGGCAGCTGACTGGATTCGTGCAGACACGAGGCAGC
ATGCCCTTCCACTGGCACCAGCTGCCCAATTTGCGCTATAAGCCACGACC
CGTTCTGGTGCCG
MXO52647.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9128-PA | 1779 | Sac1-RA | 380..837 | 406..863 | 2265 | 99.7 | Plus |
| CG9128-PA | 1779 | Sac1-RA | 1..366 | 27..392 | 1705 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sac1-RB | 2327 | CG9128-RB | 166..1003 | 26..863 | 3980 | 98.3 | Plus |
| Sac1-RA | 2365 | CG9128-RA | 204..1041 | 26..863 | 3980 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1248290..1249127 | 26..863 | 3980 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:39:27 has no hits.
MXO52647.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:41 Download gff for
MXO52647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9128-PA | 1..837 | 27..863 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:53 Download gff for
MXO52647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1041 | 26..863 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:56 Download gff for
MXO52647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1041 | 26..863 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:56 Download gff for
MXO52647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1248290..1249127 | 26..863 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:53 Download gff for
MXO52647.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1248290..1249127 | 26..863 | 98 | | Plus |
