MXO52649.5prime Sequence
760 bp (629 high quality bases) assembled on 2007-04-02
> MXO52649.5prime
CAGTCGACATGGGAACCTTGGGCAATCAGTTCATCCTCTCGCGGGAGCGT
CGCCGGTTCGGGAGGCAGTGCCTCTTCACAGACCGCAACGAGATGATCCT
CAGTGTGCAGCCGAGTGGACGGTTGCGCCTCAAGTACATACTGCGCAATC
CGATCAACGAACGGACCCAGCTGAGCGAACAGTATGCAGCATCTTCAGTG
TTGACACACAACGTGACCCTGGATTCCCATGGCTTGAATCACTACGAAGG
CGGCTGGAACGTCAAGGAGGTGAACATTATGGACGAGGAGTCCACAATGC
GCTATCGCAAAAAAGTCGAGCGTGATGACTCCTGGGGCATCGAGGTGAAC
CAATTGATGCACGCCGCAATGGACATCAGTTCGGCCAACAATGCTGTCAA
CATCTACGAGGACTTCTTTGTGGATCTACCGGAGGATTTGGGCCGCGGCA
TCAGCATGAAGATCGCTGCCAGGGGTACCCATGTCTTTCATGATCTGTGG
ATCCCATCGCGTAGGCTGATGACGTGCGAATGGCTAAACAACGATCCCAA
TCAGTTTCTCCTGTTCTATTCCAATCGAATGAGCCTGACACCGGACTACA
CAAAACAGCTAAACACGCTGCCCGATTTTGGCAACGATAATCCGCATGCA
TTCTACATTTGGAACTTGGATGATGCCAACCCGACCGGCTGCCCCATACG
ATTCTAGGAGAGTCGTACGGGTTGCCAAGGTGTGCCTGCGGGATGAGAGC
TACCTGGTGG
MXO52649.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10859-PA | 1884 | CG10859-RA | 1..670 | 9..678 | 3350 | 100 | Plus |
| CG10859-PA | 1884 | CG10859-RA | 670..751 | 679..760 | 335 | 96.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10859-RB | 1989 | CG10859-RB | 24..774 | 9..760 | 3690 | 99.5 | Plus |
| CG10859-RA | 2209 | CG10859-RA | 244..994 | 9..760 | 3690 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13397671..13398421 | 760..9 | 3665 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:01:02 has no hits.
MXO52649.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:41 Download gff for
MXO52649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-PA | 1..751 | 9..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:47 Download gff for
MXO52649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..994 | 9..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:26 Download gff for
MXO52649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..994 | 9..760 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:26 Download gff for
MXO52649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13397671..13398421 | 9..760 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:47 Download gff for
MXO52649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13397671..13398421 | 9..760 | 99 | | Minus |
