MXO52651.5prime Sequence
736 bp (734 high quality bases) assembled on 2007-04-02
> MXO52651.5prime
CAGTCGACATGACACCTAAGTCGACCCAAGATGACACCTATGTGGAGCAG
TTCATGAAGTACAACCTAAATGTCATGCACCAAATGACTAACTTCACTAC
AATGGTAGCGAAGAGCACGACCAGATCCCGCACGCGGTCTAGTGTTCGGG
CCGGAATAGGCGGCAATAAGCAGTCCATTGACGACCTGATGAACGGGATA
CTTTATGAAACTATTAACTGGGAACCGTACAGCACTGTTGAGGCTCTCGA
AGAGGCGTACGAGCCAAAGCCGTATACCAAGTCCTTTTTAAAGATCACCT
TACGCAAGTCTGACTTCTTCGAAATTCACAGCCAGACGCAGACGACGGTG
GCCAAGGGATCGCCCGAGGGCGACTATGTCCCCCCCCCCAACCGAAACTA
CGAGTATCTGACAAAAGGGAAAGGCAAAATTCGCCGGCGCTCAGACAATG
ACGCTCAGACAGATACTCTGCTCTTCACCACTCGGGCAGTCAACACCATC
CTCATAACCAAGGCCACCGTCAGCTCTTACGTTTCCAACTTTGAGATGTA
CGACACGCTGAACAATATCACCAAGGAGTTCGCAACAGCCACTATGAGTT
CGGTAAAGGACCTGACCTCGGCTCTAGCGCAGACGGAGGATGCGGATACC
TTTGAGGACGACGAGGCCGTTGCCGAANAAGACAAGGTCAGCAGCCAGAT
AGAGCGCCTGTTCCGGAGCCCCGAGTTTCGCAACGC
MXO52651.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:11:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7051-PB | 2055 | CG7051-RB | 1..366 | 9..374 | 1805 | 99.7 | Plus |
| CG7051-PA | 2295 | CG7051-RA | 241..606 | 9..374 | 1805 | 99.7 | Plus |
| CG7051-PB | 2055 | CG7051-RB | 381..728 | 389..736 | 1696 | 99.4 | Plus |
| CG7051-PA | 2295 | CG7051-RA | 621..968 | 389..736 | 1696 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RB | 2642 | CG7051-RB | 459..1186 | 9..736 | 3449 | 98.2 | Plus |
| Dic61B-RA | 2616 | CG7051-RA | 433..1160 | 9..736 | 3449 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 151252..151791 | 736..197 | 2524 | 97.8 | Minus |
| 3L | 28110227 | 3L | 151848..152036 | 197..9 | 930 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:31:42 has no hits.
MXO52651.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:42 Download gff for
MXO52651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-PA | 232..968 | 1..736 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:27:19 Download gff for
MXO52651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 424..1160 | 1..736 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:15:17 Download gff for
MXO52651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 424..1160 | 1..736 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:15:17 Download gff for
MXO52651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 151252..151790 | 198..736 | 97 | <- | Minus |
| 3L | 151848..152042 | 1..197 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:27:19 Download gff for
MXO52651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 151252..151790 | 198..736 | 97 | <- | Minus |
| arm_3L | 151848..152042 | 1..197 | 97 | | Minus |
