MXO52673.5prime Sequence
627 bp (592 high quality bases) assembled on 2007-04-02
> MXO52673.5prime
CAGTCGACATGTCGCACAAGACTAGCAACCGTCGCAGCAGCGACCTGGAG
TGTCCACTTGCTTCATTGGGCCGCAACAGCAATGCGGTACGCGACCACTA
CCACCACCCGCATCCGCTGAGCTCCAGTCCACTGGATCCACAGGCCTACA
AAATGATGTCCCGCAAGTCACCCAATCCCGGCCTGGAGGTGGCCGAAGCG
CTGGCCTCGCGCAGCTCCACGCCGCCCAGCGACCAGGCTGGGGCATCCTC
GACGGCGGCGGCGGCAGCAGTGCTCCATATGGTGCAGCAAAAAGCGGCGA
CCTTTGAGTTGAGAGGCCGCCACTCGCGACCAACCGAGCAGCAGACCAGC
TATGGAGCCCATTCCACGGCTTCGGTGGGTAGGCATGCGAAGAAGTCCCC
AGAACTACCAGCTCCAGCGTCGAGGAACGTGGCTCCCGTACCACAGCCGC
GGAACTTCCTAACACTAGAACATGTCCTGCAATTTGGAACCCAGCGACCC
AGTTGGATGCACGGCAACAGTGCGGACACGGAGGATTCGAGTGACAACAA
CGCGGGTGGCGGTGGAGCTGGAAGTGGCAGTGGTGGAGCTGGAGGACGGA
GACGTGCCCAAGGTGGCCGCTGCAGTG
MXO52673.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4221-PA | 2319 | CG4221-RA | 1..619 | 9..627 | 3095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4221-RA | 3176 | CG4221-RA | 473..1092 | 8..627 | 3100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15929975..15930594 | 8..627 | 3100 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:21:15 has no hits.
MXO52673.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:48 Download gff for
MXO52673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4221-PA | 1..619 | 9..627 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:29:10 Download gff for
MXO52673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4221-RA | 469..1092 | 1..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:52 Download gff for
MXO52673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4221-RA | 469..1092 | 1..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:52 Download gff for
MXO52673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15929971..15930594 | 1..627 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:29:10 Download gff for
MXO52673.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11755693..11756316 | 1..627 | 99 | | Plus |
