MXO52676.5prime Sequence
740 bp (642 high quality bases) assembled on 2007-04-02
> MXO52676.5prime
CAGTCGACATGGACGAGCACACGTTAAACGACCTGTTGGAGTGCTCCGTG
TGTCTTGAGCGACTGGACACCACATCGAAGGTGCTGCCATGCCAGCACAC
CTTCTGCCGCAAATGCTTGCAGGACATTGTGGCCAGTCAGCACAAGTTGC
GATGCCCGGAGTGCCGCATCCTGGTCTCTTGCAAAATTGATGAGCTGCCT
CCAAACGTCTTGCTGATGCGAATCTTAGAAGGCATGAAACAAAATGCAGC
AGCTGGCAAAGGAGAAGAAAAGGGAGAGGAGACTGAAACACAGCCGGAAA
GGGCCAAACCTCAGCCGCCAGCGGAATCAGTGGCCCCGCCTGACAACCAA
CTACTCCAGCTGCAGTCACATCAGCAATCTCATCAGCCGGCTCGTCACAA
GCAACGTCGATTTCTACTCCCCCACGCCTATGCCCTCTTTGACTTCGCCT
CCGGTGAAGCCACCGATCTAAAGTTCAAGAAAGGGGATCTGATACTGATC
AAGCATCGCATCGACAACAACTGGTTTGTGGGTCAAGCGAATGGTCAGGA
GGGCACATTTCCCATCAACTACGTCAAGGTATCGGTTCCGCTGCCCATGC
CGCAGTGCATTGCCATGTATGACTTTAAGATGGGGCCCAACGACGAGGAG
GGATGCCTCGAATTTAAGAAAAGCACTGTAATACAGGTAATGCGCCGAGT
TGATCATAATTGGGCAGAAGGACGAATTGGCCAGACCATC
MXO52676.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4909-PA | 2517 | POSH-RA | 1..732 | 9..740 | 3660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| POSH-RA | 3169 | CG4909-RA | 333..1064 | 9..740 | 3660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17569520..17570030 | 230..740 | 2555 | 100 | Plus |
| 2R | 25286936 | 2R | 17569064..17569178 | 9..123 | 575 | 100 | Plus |
| 2R | 25286936 | 2R | 17569243..17569355 | 120..232 | 565 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:31:54 has no hits.
MXO52676.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:49 Download gff for
MXO52676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4909-PA | 1..732 | 9..740 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:27:29 Download gff for
MXO52676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| POSH-RA | 325..1064 | 1..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:15:26 Download gff for
MXO52676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| POSH-RA | 325..1064 | 1..740 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:15:26 Download gff for
MXO52676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17569056..17569177 | 1..122 | 96 | -> | Plus |
| 2R | 17569246..17569354 | 123..231 | 100 | -> | Plus |
| 2R | 17569522..17570030 | 232..740 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:27:29 Download gff for
MXO52676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13456561..13456682 | 1..122 | 96 | -> | Plus |
| arm_2R | 13456751..13456859 | 123..231 | 100 | -> | Plus |
| arm_2R | 13457027..13457535 | 232..740 | 100 | | Plus |
