MXO52679.5prime Sequence
883 bp (732 high quality bases) assembled on 2007-04-02
> MXO52679.5prime
CAGTCGACATGTTCATCGAAGACGATGCGCAAATGGACAGCTTCTGGGTG
CAGAGCGCTATTGGCGCGATCAAGGCGATCGCCTTTGTCTACGACATCAT
CACCCTTCCGGTTTACTTGGTGCTGCAGAAGCCCTGGAAACGCCGTCAGG
ACTCGCGTCGCGTGAAGGCAAAGATCGTGCGGAATGATGACAATGAGCTG
ACCTACCGGACCACGGATCCACCACGGGATGTCCACGTGAAGATGCTGCA
AGAGAATATCGATACCCTGGAGAAGGTATTCAACTATGTGGCCAAAACTT
ACACGTCGAAGCGTTGTCTGGGCACCCGGCAGATCCTCAGCGAGGAGGAT
GAGGTGCAGCAGAACGGTCGAGTCTTCTAGAAGTACAACCTCGGTGACTA
CAAGTGGAAGACGTTCACCGAGGCGGAGCGCACGGCGGCTAATTTCGGGC
GCGGTCTGCGAGAACTTGGCCAGAAACCACGCGAGAACATTGTCATCTTT
GCCGAAACGCGAGCCGAATGGATGATAGCTGCCCACGGATGCTTCAAGCA
GGCTATGCCCATTGTCACTGTCTATGCTACGCTGGGCGATGATGGAGTTG
CTCATTGCATCACCGAAACGGAAGTCACCACGGTTATCACCTCCCATGAT
CTGCTGCCCAAGTTTAAGACGCTGCTCGACAAATGCCCATTGGTGAAGAC
TATTATCTATATTGAGGATCAGCTGCAAAAGACAGAAACCACTGGCTTCA
AGGAGGGCGTCAAGATCTTGCCGTTTAACCAAGTTGTCAAGACAGGACAG
GACAGTAAATTTGAGCACGTTCCACCCAAGGGAGATGACATTGCCATTAT
CATGTACACTTCCGGATCCACTGGCACACCTAA
MXO52679.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8732-PB | 2148 | l(2)44DEa-RB | 1..875 | 9..883 | 4325 | 99.7 | Plus |
CG8732-PA | 2148 | l(2)44DEa-RA | 1..875 | 9..883 | 4325 | 99.7 | Plus |
CG8732-PE | 2148 | l(2)44DEa-RE | 1..875 | 9..883 | 4325 | 99.7 | Plus |
CG8732-PH | 2148 | l(2)44DEa-RH | 1..875 | 9..883 | 4325 | 99.7 | Plus |
CG8732-PD | 2154 | l(2)44DEa-RD | 30..881 | 32..883 | 4210 | 99.7 | Plus |
CG8732-PC | 2124 | l(2)44DEa-RC | 1..851 | 33..883 | 4205 | 99.7 | Plus |
CG8732-PF | 2124 | l(2)44DEa-RF | 1..851 | 33..883 | 4205 | 99.7 | Plus |
CG8732-PG | 2124 | l(2)44DEa-RG | 1..851 | 33..883 | 4205 | 99.7 | Plus |
CG8732-PI | 2124 | l(2)44DEa-RI | 1..851 | 33..883 | 4205 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acsl-RB | 3677 | CG8732-RB | 344..1218 | 9..883 | 4345 | 99.8 | Plus |
Acsl-RH | 3887 | CG8732-RH | 554..1428 | 9..883 | 4345 | 99.8 | Plus |
Acsl-RA | 3704 | CG8732-RA | 371..1245 | 9..883 | 4345 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8678428..8678869 | 166..607 | 2180 | 99.5 | Plus |
2R | 25286936 | 2R | 8678928..8679134 | 607..813 | 1035 | 100 | Plus |
2R | 25286936 | 2R | 8676472..8676608 | 32..168 | 685 | 100 | Plus |
2R | 25286936 | 2R | 8680011..8680081 | 813..883 | 355 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:10:46 has no hits.
MXO52679.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:50 Download gff for
MXO52679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8732-PB | 1..873 | 9..881 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:57 Download gff for
MXO52679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acsl-RA | 364..1245 | 1..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:54 Download gff for
MXO52679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acsl-RA | 364..1245 | 1..883 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:54 Download gff for
MXO52679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8676472..8676607 | 32..167 | 100 | -> | Plus |
2R | 8678430..8678868 | 168..606 | 99 | -> | Plus |
2R | 8678928..8679134 | 607..813 | 100 | -> | Plus |
2R | 8680012..8680081 | 814..883 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:57 Download gff for
MXO52679.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4566433..4566639 | 607..813 | 100 | -> | Plus |
arm_2R | 4567517..4567586 | 814..883 | 100 | | Plus |
arm_2R | 4563977..4564112 | 32..167 | 100 | -> | Plus |
arm_2R | 4565935..4566373 | 168..606 | 99 | -> | Plus |