MXO52684.5prime Sequence
655 bp (582 high quality bases) assembled on 2007-04-02
> MXO52684.5prime
CAGTCGACATGAGCAGATTGGGCTTTGAGCAATTCCCGGACTACCAGGTG
CCCGGCATGAAGCATCCTGATTTCTCGCCCTACGAGTCCAATGGCGGCTC
CATTGTGGCCATCGCCGGAGATGACTTTGCCGTAATTGCAGCGGACACCC
GCCTGAGCAGCGGCTACAACATTCACTCGCGAACGCAGAGTAAACTCTTT
AAACTCTCGCCCCAGACAGTGTTGGGTTCCGCAGGCTGCTGGGCGGACAC
GCTCTCGTTGACCGGATCGATTAAGGTGCGCATGCAGAGCTACGAGCATA
CCCATCTGCGCACCATGACCACTGAGGCCGTGGCCCAGATGCTCTCCATC
GCCATGTACAATCGCCGCTTCTTCCCGTACTACGTGTCGAACATTCTGGC
TGGAATTGACAACGAGGGCAAGGGCGTCGTCTACTCCTACGATCCCATCG
GTCACTGCGAGAAGGCTACATACCGCGCCGGCGGCACTGCCGGCACCCTG
CTGCAACCGGTGCTGGACAACCAGATTGGTCACAAGAACATGAATTTGGA
AGACGCCGACAAGATCAAGTTAACCAAGGAGCGGGGCCGTGAGCGTTGCC
TCCGACACCTTCATCTCTGCCGCTGAGCGCGACATCTACACCGGCGACTC
TGTGC
MXO52684.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4097-PA | 708 | Pros26-RA | 1..577 | 9..585 | 2885 | 100 | Plus |
| CG4097-PA | 708 | Pros26-RA | 575..646 | 584..655 | 360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta6-RA | 944 | CG4097-RA | 99..746 | 7..655 | 3220 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16609598..16610155 | 655..97 | 2745 | 99.8 | Minus |
| 3L | 28110227 | 3L | 16610230..16610320 | 97..7 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:18:17 has no hits.
MXO52684.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:51 Download gff for
MXO52684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4097-PA | 1..646 | 9..655 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:41 Download gff for
MXO52684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta6-RA | 93..746 | 1..655 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:26 Download gff for
MXO52684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta6-RA | 93..746 | 1..655 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:26 Download gff for
MXO52684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16609598..16610154 | 98..655 | 99 | <- | Minus |
| 3L | 16610230..16610324 | 1..97 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:41 Download gff for
MXO52684.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16602698..16603254 | 98..655 | 99 | <- | Minus |
| arm_3L | 16603330..16603424 | 1..97 | 95 | | Minus |
