MXO52687.5prime Sequence
755 bp (752 high quality bases) assembled on 2007-04-02
> MXO52687.5prime
CAGTCGACATGATCTGGTCTGGCAACGCCAGATATTCAAATGTTCAGAAT
TCGAGCATGGTGCCTCCGTCACGACCCAATGTCACCCGTCTGTCGGACGA
GTCCGTGATGCTGCGCTGGAGTGTGCCACAAAACTCTGGACTCCAGATCA
CCTTTTTCAAGGTGCAGTATCGCATGTTGGGCGACGGAAAAAATCGGAGG
AAGAACTGGCAGACGACCAGCGACAATATCCCGTACGGAAACGCGCACGG
ATCCGGGCCTGGCCAGGGGAACAGTCACTGGCGGGCGCGGAACCGGGACA
GGGAGTATGAAATGGGCAATCCGCCCAAGAACTTCACCTCCTCCGTTACG
GGACTGACCGCCGGCAAGTACTACCGCTTCCGGATCGTGGCGGTGTACTC
CAATAACGACAACAAGGAGGGCAACACCTCCCTCAAGTTCTTCCTGCAGA
ATGGAACGTCCAAGTCGAATCTGCCAGTGCCGGAACTACGCGAGGTGGAG
ACGCTTTCCGAGTCGGCCGTGGTGCTCCATTGGTCCCTGGTATCCTCGAC
TCAAAATGAGGATATAGACGGGTACTATGCCTACTATAGGCCAGCGGACT
CAGCAGCGGAGTATTTGAAGGCCACGGTGGATGGCGGAATGAGCAGGAGC
TTCAAGATAGACCTCCTTCGTCCAGGAACCCCTTATGAGTTCAAATTGCA
ATCGTTCAACTCCGACGCAGCCTCTGAATTCAGTGCTATTCGGCAAGCGA
GGACC
MXO52687.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32796-PA | 1644 | CG32796-RA | 1..747 | 9..755 | 3735 | 100 | Plus |
| CG32796-PB | 2997 | CG32796-RB | 1397..2100 | 52..755 | 3520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| boi-RA | 2721 | CG32796-RA | 194..940 | 9..755 | 3735 | 100 | Plus |
| boi-RG | 4544 | CG32796-RG | 1739..2442 | 52..755 | 3520 | 100 | Plus |
| boi-RF | 4509 | CG32796-RF | 2025..2728 | 52..755 | 3520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2446894..2447597 | 755..52 | 3520 | 100 | Minus |
| X | 23542271 | X | 2447657..2447699 | 51..9 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:01:09 has no hits.
MXO52687.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:53 Download gff for
MXO52687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32796-PA | 1..747 | 9..755 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:52 Download gff for
MXO52687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boi-RA | 185..936 | 1..755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:29 Download gff for
MXO52687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| boi-RA | 189..940 | 1..755 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:29 Download gff for
MXO52687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2446894..2447597 | 52..755 | 100 | <- | Minus |
| X | 2447657..2447704 | 1..51 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:52 Download gff for
MXO52687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2340927..2341630 | 52..755 | 100 | <- | Minus |
| arm_X | 2341690..2341737 | 1..51 | 94 | | Minus |
