MXO52692.5prime Sequence
409 bp (381 high quality bases) assembled on 2007-04-02
> MXO52692.5prime
CAGTCGACATGGGTCTTAGGTCCCTGCGCATTTCCACAACGCAATCCGAT
TCCGCGTGCAGCAGTTCGGCGGAATCGTCGGATTGCGAGAGCTCCAGCCA
CCATCACCACCACCACAGTCACCACAACTACAACGAGGCGCCCGTGGAGA
TAATCCCTGGACTACTCTTCCTGGGAAATGCCACACACAGCTGCGACTCG
GAAGCGTTGAAAAAGTACAATATAAAGTATGTTTTGAATGTGACACCAGA
TTTGCCAAATAAGTTCAAGGAGTCGGGCGACATCAAGTATCTGCAGATTC
CGATCACGGATCACTACTCACAAGATTTGGCCATACATTTCCCGGATGCC
ATACAGTTTATAGAGGAAGCGCGGTCCGCAAGCTCGGTGGTGCTGGTCCA
CTGCCTGGC
MXO52692.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14080-PB | 1236 | Mkp3-RB | 511..911 | 9..409 | 2005 | 100 | Plus |
CG14080-PA | 726 | Mkp3-RA | 1..401 | 9..409 | 2005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mkp3-RD | 4696 | CG14080-RD | 1214..1614 | 9..409 | 2005 | 100 | Plus |
Mkp3-RC | 3119 | CG14080-RC | 1214..1614 | 9..409 | 2005 | 100 | Plus |
Mkp3-RA | 2053 | CG14080-RA | 148..548 | 9..409 | 2005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19069682..19069891 | 227..18 | 1050 | 100 | Minus |
3L | 28110227 | 3L | 19069487..19069624 | 363..226 | 690 | 100 | Minus |
3L | 28110227 | 3L | 19069237..19069284 | 409..362 | 240 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:27:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
I-element | 5371 | I-element DMIFACA 5371bp Derived from M14954 (g157749) (Rel. 44, Last updated, Version 2). | 1236..1272 | 98..133 | 110 | 81.1 | Plus |
gypsy10 | 6006 | gypsy10 GYPSY10 6006bp | 2466..2529 | 207..270 | 104 | 62.5 | Plus |
MXO52692.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:24:55 Download gff for
MXO52692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14080-PA | 1..401 | 9..409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:16 Download gff for
MXO52692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mkp3-RA | 142..548 | 1..409 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:41 Download gff for
MXO52692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mkp3-RA | 142..548 | 1..409 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:41 Download gff for
MXO52692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19069237..19069282 | 364..409 | 100 | <- | Minus |
3L | 19069487..19069622 | 228..363 | 100 | <- | Minus |
3L | 19069682..19069891 | 18..227 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:16 Download gff for
MXO52692.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19062337..19062382 | 364..409 | 100 | <- | Minus |
arm_3L | 19062587..19062722 | 228..363 | 100 | <- | Minus |
arm_3L | 19062782..19062991 | 18..227 | 100 | | Minus |