MXO52709.5prime Sequence
831 bp (771 high quality bases) assembled on 2007-04-02
> MXO52709.5prime
CAGTCGACATGCTGGACGCTCTAATTCGGGCAGCGGAGCTTGTGGATCTG
GTCCTGCTGCGTCCGCTGGCCAGCGTGATTGATGCAGTGATTACTGGCGT
GTACTACTTCCTGTGGGGCAGCTACCTCGTCGGCTTCTGTTTGGTGGAGG
GCAGCAGGAAAGGATGGAATCTGTTGAGATGCGCGGTCAGGAATATCAAC
GAGGGCATCCGCGACTTGGGCCTCATCACGCTAGATGTGGCGGACTACTT
CTACGGCGGCACCAAAGGCGGGCTCAAGAATGTACTCGATTTTGGTCACT
GCATATCCCGATTCATCTGCAACTTACTCATCGATCTGGGTGATGGCATC
TTGTGGCTGCTGATGCTGCTGCCGAGGGCCATACTATTCCTCTGGGACTG
CCTCCTAGACTTTGTGGTGCACTCAATCGTGGCCCATGGCTTGAGCTTGC
TGAACAGTGCGTTCCGGGCCTCGATAGGATTGGCCCTGCTCCTCGTTCTC
TATATGTTCCGCCGCTATGTGTACCTGATGCTCATCTACCTGCTGCAACG
TGGACGCATTGAAATCTCGACGAAGACGCAAAGCGTTTACCTATGGACCC
ATCATAAATTGCAACACTTCATACACAATGTTTGGTATGTGTCAGAGAAC
GCAGGATCCGCGAGTCCAGAACGCTGTGTCGTGTGCATGGCTCANAGCAG
GAACGTAGTAGTCATGCCATGCCGGCACCTCTGCCTCTGCAAAGAGTGCT
CCCTGCAGCTCGTGCTCCTTTTAGAAGACCGCTGTCCTGTCTGCAGGCAC
AACATTACGTCGTTCCTGTCAGTTTACGTTG
MXO52709.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2617-PA | 825 | CG2617-RA | 1..822 | 9..830 | 4091 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2617-RB | 1062 | CG2617-RB | 81..903 | 8..830 | 4104 | 99.9 | Plus |
| CG2617-RA | 1262 | CG2617-RA | 81..903 | 8..830 | 4104 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20682448..20683270 | 8..830 | 4104 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:07:55 has no hits.
MXO52709.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:01 Download gff for
MXO52709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2617-PA | 1..822 | 9..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:14 Download gff for
MXO52709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2617-RA | 74..903 | 1..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:59 Download gff for
MXO52709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2617-RA | 74..903 | 1..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:59 Download gff for
MXO52709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20682441..20683270 | 1..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:14 Download gff for
MXO52709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20682441..20683270 | 1..831 | 99 | | Plus |
