MXO52719.5prime Sequence
876 bp (828 high quality bases) assembled on 2007-04-02
> MXO52719.5prime
CAGTCGACATGTCTACCAATCAGCAGCAGCAGGCGAATCCTTCGGCGGCC
GTTGCCGCACCCGCCGCCTCCTCGGAATACCTGAAACGCACCTGCCTCAT
CTGCGGCTGCCACACCAACCAGACGATCAATATCTACGAGCCCCGCTCCG
GACCCAATATCGTTCAGCTAATCCAGGCGAAATTCAAGTTTCAGCCCCTG
AACGAGGACAAATTCCTCTGCTTTAGCTGCAACAACTGGCTGATCAACTG
GCACTCCCTGCAGGCGGTCAACAGCAATGAGGCCGAAAGCCAGAGCCAAA
GTCCCTCGCACATGGGCAACAGTGTGCTGCAGCAGGAAAGGACGAAGCTC
CGTCCGGTGGCGATGGTTCGACCCACGGTGCGAGTGCAGCCCCAATCGCA
GCCCCAACTGCAGCCCCAAGTTCCAATTAATCCCACACCCGCACCCATAG
TCTATTCGAAGCGAAGAGCCAGCAGACGCAGTGCCTCCGTCAGCCGGATG
AGCCGAGTGCTGCGCCAGTGTTGTGTGGAGAGTCTGCGGCGGAGTCCCAA
GAAGCGCAATCAGCAGTCGGTGTTCGTCTGTCTTAGGCCGCAGGGCCAGA
AGAGGAGCAATGCGATCTGCAAGGTGGAGTGTGTGGCGCCGCGCCGGAAA
CCAGTGGAGCGACTGGTTAAGGATGTGGCAGCTACAGCTACACCCACACC
AGTGCTCAATACACAATCCACGCCCACTTACCAAAGATTCCCGCAGCCCA
GTGTGGATGGCAAAGTAGTGGCCATGTTCCGTCGACTGGGAACCACACTC
AGTCGGGAAGAACCCGCCGCATATTCAGCAGAATCAAACCCCGCCTGCTC
GAAACTCCCGCAGATCATGAGTCCGC
MXO52719.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10108-PA | 1203 | phyl-RA | 1..868 | 9..876 | 4340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| phyl-RA | 1839 | CG10108-RA | 245..1112 | 9..876 | 4340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14428063..14428750 | 876..189 | 3440 | 100 | Minus |
| 2R | 25286936 | 2R | 14431908..14432093 | 194..9 | 930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:53:11 has no hits.
MXO52719.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:03 Download gff for
MXO52719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10108-PA | 1..868 | 9..876 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:59 Download gff for
MXO52719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phyl-RA | 241..1112 | 1..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:07 Download gff for
MXO52719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phyl-RA | 241..1112 | 1..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:07 Download gff for
MXO52719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14428063..14428744 | 195..876 | 100 | <- | Minus |
| 2R | 14431908..14432097 | 1..194 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:59 Download gff for
MXO52719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10315568..10316249 | 195..876 | 100 | <- | Minus |
| arm_2R | 10319413..10319602 | 1..194 | 97 | | Minus |
