MXO52724.5prime Sequence
477 bp (477 high quality bases) assembled on 2007-04-02
> MXO52724.5prime
CAGTCGACATGGCCAAAAACACGTCCAGCAACGCGTTCCGCAAGATCGAT
GTGGACCAGTACAATGAGGACAACTTCCGGGAGGATGATGGGGTGGAGAG
CGCGGCAGCCGGTCCGGATGAGAGCGAGATTACGACGCTGCTGACGCAGG
GAAAATCCGTGGAGGCGCTCCTGAGTGCGCTGCAGAATGCCCCGCTGCGC
TGCAAGAACCAGAATGTGAAGGACCACGCCCTGAACATCACGCTGCGGGT
GCTGCTGTCCATCAAGTCGACGCAAATGGACCAGGCCATCGACACCTTGG
ACCAGAACGACCTAATAGACGTGCTGATGAAGTACATATATCGGGGATTC
GAGATCCCCTCGGAGGGCTCCAGTGGCCACCTGCTGCAGTGGCATGAGAA
GGCCTTCGCCAAGGGAGGAGTGGGCTGCATTGTCCGCGTGCTGTCCGACA
CAAATCGCGCCGCAAGCTTTCTAGACC
MXO52724.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9881-PA | 456 | p16-ARC-RA | 1..453 | 9..461 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arpc5-RB | 1070 | CG9881-RB | 76..530 | 7..461 | 2275 | 100 | Plus |
| Arpc5-RA | 785 | CG9881-RA | 76..530 | 7..461 | 2275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2580642..2580883 | 220..461 | 1210 | 100 | Plus |
| 2L | 23513712 | 2L | 2580367..2580582 | 7..222 | 1080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:01:26 has no hits.
MXO52724.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:05 Download gff for
MXO52724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9881-PA | 1..456 | 9..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:01 Download gff for
MXO52724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arpc5-RA | 71..530 | 1..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:36 Download gff for
MXO52724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arpc5-RA | 71..530 | 1..461 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:36 Download gff for
MXO52724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2580362..2580581 | 1..221 | 98 | -> | Plus |
| 2L | 2580644..2580883 | 222..461 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:01 Download gff for
MXO52724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2580362..2580581 | 1..221 | 98 | -> | Plus |
| arm_2L | 2580644..2580883 | 222..461 | 100 | | Plus |
