MXO52725.5prime Sequence
559 bp (510 high quality bases) assembled on 2007-04-02
> MXO52725.5prime
CAGTCGACATGGCGCTCCAAATAGCGCAGAACAACCGCGACGGCCAGCAG
CTGGTGGGCGCTGATCAGGGAAAGGTGGAGGTGTACGTGCTGTTTGCAAA
CACCACCTATCGCACCCTGGATCTGTACTGGGTGTGCGAGCGGGAGCGGG
AGAACATGTACCTTACCCTCAAGCCCTTCGAGGAGGTGCGGGTGAACACG
TTCACCACACACAGCTGGCTGTTCCGGGATTACTACACGGGCGAACGGAT
GCACGTACGCTCGCAGAGGATCTTTCAGCCGATTCGGGTGCGGGTACCCA
AGAGCCAGCAGAGTCCGGATCAGCTGGTTGACGTACGCAGCGAAGTGCTG
ATCCACTTTCCGATGAGATCGCTGCGCGAAAACTGCCTCTGGCTGGTCGC
CCGCTGGCTGATCCGGACGAGCAACGCGCCACGGAGGATTATCCACGGAT
ACCACATACCCTCGACGCTGAAGCAACAGCTGCTCAGCCTGCTGACCTGC
ATCGAGTCCTATTCCCGAGTGGCGGGCACGCGACGTCNGCGTGCAAGCTT
TCTAGACCA
MXO52725.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:12:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13221-PA | 537 | Vhl-RA | 1..534 | 9..542 | 2651 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vhl-RB | 946 | CG13221-RB | 154..687 | 9..542 | 2659 | 99.8 | Plus |
| Vhl-RA | 1309 | CG13221-RA | 154..687 | 9..542 | 2659 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11279878..11280411 | 9..542 | 2659 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:03:21 has no hits.
MXO52725.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:06 Download gff for
MXO52725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13221-PA | 1..537 | 9..543 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:27 Download gff for
MXO52725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vhl-RA | 145..687 | 1..542 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:39:56 Download gff for
MXO52725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vhl-RA | 145..687 | 1..542 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:39:56 Download gff for
MXO52725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11279869..11280411 | 1..542 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:27 Download gff for
MXO52725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7167374..7167916 | 1..542 | 99 | | Plus |
