MXO52730.5prime Sequence
793 bp (753 high quality bases) assembled on 2007-04-02
> MXO52730.5prime
CAGTCGACATGTTGGCCAAAAAACAGAAAATGCAGGAGACGGACACGGAG
CAAGAGGCCACGCCACATACGATACAGGCGCGCCTCGTTTCGGACACGGG
CGAGGAAGCCGGCCCGCCAATCGACCTGCCGGCAGGAATCACTACCCAGC
AATTGGGACTGATTTGCAACGCGCTGCTGAAAAACGAGGAAGCCACTCCA
TATTTGTTTTTCGTGGGCGAGGATGAGATCAAGAAGAGCCTGGAGGACAC
GTTGGACTTGGCGTCAGTGGACACCGAAAACGTGATCGATATTGTGTATC
AGCCACAGGCGGTTTTCAAAGTGCGCCCAGTGACAAGATGCACGAGTTCC
ATGCCGGGACACGCCGAGGCTGTGGTTTCGCTGAATTTCAGCCCGGATGG
TGCTCATCTCGCCAGTGGAAGTGGCGACACCACAGTGCGATTGTGGGATC
TTAACACAGAGACACCGCACTTCACCTGCACAGGTCATAAGCAGTGGGTT
CTGTGCGTATCCTGGGCTCCGGATGGCAAACGGTTGGCCAGCGGTTGCAA
AGCGGGCTCTATAATCATCTGGGACCCGGAGACGGGTCAGCAGAAGGGGC
GACCATTGAGTGGGCACAAGAAACACATCAACTGCCTCGCCTGGGAACCG
TATCATCGCGATCCGGAGTGCAGGAAACTTGCTTCCGCCAGTGGAGACGG
GGACTGCCGGATTTGGGACGTAAAATTGGGCCAGTGCCTTATGAACATTG
CCGGACACACAAATGCTGTGACAGCAGTGAGATGGGGTGGAGC
MXO52730.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2863-PA | 1467 | Nle-RA | 1..785 | 9..793 | 3825 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nle-RA | 1584 | CG2863-RA | 58..842 | 9..793 | 3865 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 567280..568064 | 793..9 | 3865 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:35 has no hits.
MXO52730.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:08 Download gff for
MXO52730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2863-PA | 1..785 | 9..793 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:27 Download gff for
MXO52730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nle-RA | 50..842 | 1..793 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:15 Download gff for
MXO52730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nle-RA | 50..842 | 1..793 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:15 Download gff for
MXO52730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 567280..568069 | 1..793 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:27 Download gff for
MXO52730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 567280..568069 | 1..793 | 98 | | Minus |
