MXO52732.5prime Sequence
904 bp (824 high quality bases) assembled on 2007-04-02
> MXO52732.5prime
CAGTCGACATGGAATTTTTACACGAATCCGTTGCACTGGGCGTGGATCTG
CTAATACTTGGCCTGTGTGCGCGCGAGTACGTGCACTACAAGCGAACTGC
CAAGGTGCTGAAGGCGGCACCACAATACAACATCGATGGAGACCTAAAAT
CGGTGGTGGAGCGGCAGCGCGACAAGAAGATACCATATGCGGTAATCCGG
GGCACAGTGACGCCCATCGGGGTGCCACTGAGGAGCTCCCTGGTGCCCAG
TGTGAGTGGAGTGCTGCAGATTGTGAAGCTGCATGAGCACAGGGTAACGC
GCGGATTCGCCGGCTTCTGGACGGAACAACACAAGTTGCTGCACGAATCC
GCCAACGAGATGCCCTTCGAGTTGCGTAACCAGAGCCATGGTGTGGAGAT
TGTGGACGCCTTGAGTGCCGCCGTCTTGGACGTGGACGTGGTCTACGACA
ACTACGAGCCCTCCAATCTGTCCCTCTTCGACCATGTGTTTGGTTTCTTC
TCTGGCGTCCGTCAGAGGGGATTGCAAACGACGGAGGAGGTGCTCAGAGA
AGGCAGCTTCCTGACCCGCTATTGGTGAACTGGAGTTGGATGGCGATACT
CTGCGCATGCAGCCCTCCAATGAGGGACCGCTCTTCCTGACCACTGCCAC
CAAGTCCACGCTTATTAAGCGGTTCGAAGATGCCAAGACAACGACGATAC
TCAAGCTGGTTGTGTGCAGCACCATCTCTGCCATCCTGGTTGCCTTCATT
GCCAAGAAACTCTACCGAAAACGAAAGCAGGAGCGGGAGGAGGCCAAAAT
TCGCGAACGCCTGGATACGGAGCGTCGGGAGCGGAGGGCGAGGAGTCGTC
CTCACACTCTGTCCCAGGAATCACTCTGCGTGGTGTGCTCCACCAATCCC
AAGG
MXO52732.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1134-PA | 1017 | CG1134-RA | 1..558 | 9..566 | 2790 | 100 | Plus |
| CG1134-PA | 1017 | CG1134-RA | 557..860 | 566..869 | 1520 | 100 | Plus |
| CG1134-PA | 1017 | CG1134-RA | 864..895 | 873..904 | 160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mul1-RB | 1656 | CG1134-RB | 79..973 | 9..904 | 4410 | 99.7 | Plus |
| Mul1-RA | 1213 | CG1134-RA | 79..973 | 9..904 | 4410 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4021702..4022287 | 112..698 | 2885 | 99.8 | Plus |
| 3L | 28110227 | 3L | 4022346..4022551 | 699..904 | 985 | 98.5 | Plus |
| 3L | 28110227 | 3L | 4021535..4021640 | 9..114 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:46 has no hits.
MXO52732.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:09 Download gff for
MXO52732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1134-PA | 1..895 | 9..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:30 Download gff for
MXO52732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mul1-RA | 73..973 | 1..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:22 Download gff for
MXO52732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mul1-RA | 73..973 | 1..904 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:22 Download gff for
MXO52732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4021529..4021639 | 1..113 | 96 | -> | Plus |
| 3L | 4021704..4022287 | 114..698 | 99 | -> | Plus |
| 3L | 4022346..4022551 | 699..904 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:30 Download gff for
MXO52732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4021529..4021639 | 1..113 | 96 | -> | Plus |
| arm_3L | 4021704..4022287 | 114..698 | 99 | -> | Plus |
| arm_3L | 4022346..4022551 | 699..904 | 99 | | Plus |
