MXO52739.5prime Sequence
719 bp (717 high quality bases) assembled on 2007-04-02
> MXO52739.5prime
CAGTCGACATGCAAAAACTGCGCACTTTGTTTCTCAGGAAATCAGCCCAT
ACAAATCGCCCAGGTAGCTCTACTTCTGGCGAGGCAGACGATGCCAGCAG
GCCAGGTGAATCTATCCTGGTGCGGGTAATCTGCCCCAGCTCTCGGGTTC
TTATCTTCAAAACGGACGTTAATAAGCGCCTAAACGAGCTGAAGAGTGAG
GTGATTCTGGAACTGAGCGACGATCCCGACTCCATCCAGCTATTTGCCCC
AGATGTGCGGCATCTTAATCCGCGATACCGTCTCTATCGGGCGGAATACT
TCGGCGGCGAGCTTAACGAGGGCGACACGCTGGCCCAGCTAAAAGTTCGC
AACAATGAGACTTTTATACTCTCTCCACGACGCAATACTCTGCCGCAGAC
TGTTTCACGGATACGTGAGGTTCCTGGCCCAAATGAGCAGCTGGTGGAGA
GCGCCACCCGATACGTGCCCGTCAATTGCAACCAGCTGCCCACCATCGAT
ATTAATGAAATCTTTCAGCAGTCGAATATCCAATACGATGTGCGAAAGGT
GTTGATCTCTTTGGCTCAAGCTTCTGCGGCGGTTATAGGAGCTGGCCCTT
ATGCTCCACGCCTGATAGCTATGCTAAAGCAACGTTTGATCAATCGCCGA
AATCAGCAAGCGGATACGCTGCAATGCCTCGTGGACATGGGCTTCAAGCG
GGAGCTAGCCGCATTTGCC
MXO52739.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11025-PB | 1308 | isopeptidase-T-3-RB | 1..711 | 9..719 | 3480 | 99.5 | Plus |
CG11025-PA | 1674 | isopeptidase-T-3-RA | 396..1077 | 38..719 | 3360 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
isopeptidase-T-3-RB | 1778 | CG11025-RB | 105..815 | 9..719 | 3510 | 99.6 | Plus |
isopeptidase-T-3-RC | 2491 | CG11025-RC | 532..1226 | 25..719 | 3445 | 99.7 | Plus |
isopeptidase-T-3-RA | 2479 | CG11025-RA | 533..1214 | 38..719 | 3380 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19671359..19671850 | 36..527 | 2430 | 99.6 | Plus |
2R | 25286936 | 2R | 19671906..19672097 | 528..719 | 960 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:06:35 has no hits.
MXO52739.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:10 Download gff for
MXO52739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11025-PB | 1..711 | 9..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:22 Download gff for
MXO52739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
isopeptidase-T-3-RB | 105..815 | 9..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:57 Download gff for
MXO52739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
isopeptidase-T-3-RB | 105..815 | 9..719 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:57 Download gff for
MXO52739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19671267..19671295 | 9..37 | 96 | -> | Plus |
2R | 19671361..19671850 | 38..527 | 99 | -> | Plus |
2R | 19671906..19672097 | 528..719 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:22 Download gff for
MXO52739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15558772..15558800 | 9..37 | 96 | -> | Plus |
arm_2R | 15558866..15559355 | 38..527 | 99 | -> | Plus |
arm_2R | 15559411..15559602 | 528..719 | 100 | | Plus |