MXO52742.5prime Sequence
327 bp (327 high quality bases) assembled on 2007-04-02
> MXO52742.5prime
CAGTCGACATGAATCGCATTCTCGAGAAGGTGATTCACCAGAATGGAACA
ATCGTGGATCGCATTCTATCGGAACATACTATTGGGTATGTGGTGTCCGA
TAACACAGCCAATGCGGTGGCCGAAACATCCTTCGATAACACAAGTGCCC
AGGCGATCCTGAAGCACTTACATGGACTCCTGGTGAGCACCTGCCAAAGC
GTAGTCCGGGACATTGACCCGTCCAACAAACTCTGCTTCATGCGCCTGGG
CACTCGCAAGTTCGAGTATCTGGTGGCCCCAGAGGAGTACTTCACCATTA
CAGTGGTTCAAGCAAGCTTTCTAGACC
MXO52742.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31275-PB | 306 | CG31275-RB | 1..303 | 9..311 | 1515 | 100 | Plus |
| CG31275-PA | 306 | CG31275-RA | 1..303 | 9..311 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31275-RA | 594 | CG31275-RA | 62..364 | 9..311 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16750971..16751273 | 311..9 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:39:44 has no hits.
MXO52742.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:11 Download gff for
MXO52742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31275-PA | 1..306 | 9..314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:06 Download gff for
MXO52742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31275-RB | 117..423 | 9..315 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:04 Download gff for
MXO52742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31275-RA | 62..368 | 9..315 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:04 Download gff for
MXO52742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16750966..16751273 | 9..315 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:06 Download gff for
MXO52742.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12576688..12576995 | 9..315 | 99 | | Minus |
