MXO52745.5prime Sequence
837 bp (836 high quality bases) assembled on 2007-04-02
> MXO52745.5prime
CAGTCGACATGAGCCACGGCGACCAGAGTCAAAACCAGAGCAGCCAGCGG
AGCCAGGCGCTCACTGGCGGTGGTGACTCCCCGAGGGACAGGGAGAAGGA
AAAGAAGGGCTGGTTCCACTCGCTGACCAGGCGCAAGAAGTCCGACTCGG
CGCTGGCCGTGACTGCATCCGCCGCCGTCTCCACCAGTGGATCGCAGAAC
AACAACAACGAAGTGTGCGTCCTTGAGGCAGCGGACTCTTCCATGGCCAG
CTGCAGCAATGGGGGCACGGGCACAGGAACTCTGCGCAGAAGGCGGGACA
AGGACAAGCGAAACGTGTTTGCCAGACTACGAAGGAAGGTGGGCCAAGGG
CTCAGCTCCCTGCGAAACTGGCACTCCATGGGCGACTGCGACGACGGCGG
AACTACTGATGCCACCTACGAGTTCCTTACGCCGGCCATCTGTCCGGAAC
CCACGCTACCATTCACACACGACTACTTGCGCTTTATCCGGAAGAAATGG
CTTGAGCGCGAGGACGCCCACTCGCCCAACCAGATCATGTACAAGGCCTG
CTCCGAGATGCTCAACCAAGTGTGGTACTGGGGTGAGATCTCCAGGCGCG
ATTCGCAGCGGCAGTTGAGTGACAAGCCGACTGGGTCGTTTCTAGTCCGC
GACTCGGAAACCAGCGGATCCCAATTCACGCTCAGCTTTCGGATTGTGAA
CGTAACCCTGCATTATCGACTGGAATATCGCGACAATTTTTGGCACTTCG
AGGAACTTAAGTACGAGTCCATTGTCGAGATGATCGAAGATATCTTGCAC
CGCTGCACCAACGACAACTTTGTGTGCTTTGTGAAGG
MXO52745.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2160-PA | 1029 | Socs44A-RA | 1..829 | 9..837 | 4145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Socs44A-RA | 1840 | CG2160-RA | 131..959 | 9..837 | 4145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8127705..8128261 | 9..565 | 2785 | 100 | Plus |
| 2R | 25286936 | 2R | 8128324..8128595 | 566..837 | 1360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:30:08 has no hits.
MXO52745.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:12 Download gff for
MXO52745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2160-PA | 1..829 | 9..837 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:37 Download gff for
MXO52745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Socs44A-RA | 122..959 | 1..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:38 Download gff for
MXO52745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Socs44A-RA | 122..959 | 1..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:38 Download gff for
MXO52745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8127696..8128261 | 1..565 | 99 | -> | Plus |
| 2R | 8128324..8128595 | 566..837 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:37 Download gff for
MXO52745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4015201..4015766 | 1..565 | 99 | -> | Plus |
| arm_2R | 4015829..4016100 | 566..837 | 100 | | Plus |
