MXO52747.5prime Sequence
537 bp (537 high quality bases) assembled on 2007-04-02
> MXO52747.5prime
CAGTCGACATGCCAGTCATCAAATTGCAGTCCTCCGATGGCGAAATTTTC
GAGACCGACATCGAGACTGCCAAGTGCTCGAGCACCATTAAGACCCTATT
GGAGGATTGTCCAGTGGAAGCGGAGAACGACACTCTTATCCCGCTGCCCA
ATGTGAACTCGACGATCCTGAAGAAGGTCCTCATTTGGGCCAAGCATCAT
CGCGAGGACATTGCAGAGGAGAACGAAGAGGAAGCGGCCAAGTCCGTCGC
TGTGCAGATCACCCCCTGGGACGCCGAGTTCCTGTCCATGGATCAGGGCA
CGCTCTTCGAACTCATCTTGGCGGCCAACTACCTGGACATTCCCAATCTG
CTGAACGCCGCCTGCATGACGGTGGCCAACATGATTAAAGGCCGCACGAC
GGAGGAGATTCGCCAGACCTTTCACATAACCAACGATTTCTCGCCCTCCG
AGGAGGATTTGATGACGATGGAGTCGGAAGTCCCGCAGGAGGACGAGGCG
ATAGAGTACGGCGAAATTATAGCAAGCTTTCTAGACC
MXO52747.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12227-PA | 516 | skpF-RA | 1..513 | 9..521 | 2565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SkpF-RA | 695 | CG12227-RA | 73..586 | 8..521 | 2570 | 100 | Plus |
| SkpB-RA | 877 | CG8881-RA | 530..628 | 294..392 | 195 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23458174..23458687 | 521..8 | 2570 | 100 | Minus |
| 2R | 25286936 | 2R | 12139544..12139642 | 392..294 | 195 | 79.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:52:13 has no hits.
MXO52747.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:13 Download gff for
MXO52747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12227-PA | 1..516 | 9..525 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:01 Download gff for
MXO52747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| skpF-RA | 68..592 | 1..529 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:29 Download gff for
MXO52747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SkpF-RA | 68..592 | 1..529 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:29 Download gff for
MXO52747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23458168..23458692 | 1..529 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:01 Download gff for
MXO52747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19345691..19346215 | 1..529 | 98 | | Minus |
