MXO52749.5prime Sequence
528 bp (528 high quality bases) assembled on 2007-04-02
> MXO52749.5prime
CAGTCGACATGTCCGAACTGCAAGCATCGCTACTGCTCAATCGCCAGCTC
TCCGAATTACAACGCCATCCCGTCGAGGGCTTCTCCGCCGGTCTGGTCAG
CGACTCCGACATCTTCAAATGGGAGGTGGTGATCATCGGTCCCCCAGATA
CGCTATACGAGGGCGGCTTCTTCAAGGCTCACCTGATCTTCCCCAAAGAG
TACCCACTGCGCCCGCCCAAGATGAAGTTCATCACCGAAATCTGGCATCC
CAATATTGACAAGGCCGGCGACGTTTGCATCTCGATCCTCCACGAACCTG
GTGACGATAAGTGGGGCTACGAGAAGGCCGAGGAGCGCTGGCTACCGGTC
CACACCGTGGAGACGATCCTTCTTTCCGTTATCTCCATGCTCACCGATCC
CAATGACGAGTCGGCCGCCAATGTGGATGCGGCCAAGGAGTACCGGGAGA
ATTATGCGGAATTCAAGCGCAAGGTCACCAGGTGCGTCCGCCGTAGTCAG
GAGGAGGTGGAAGCAAGCTTTCTAGACC
MXO52749.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9602-PA | 507 | CG9602-RA | 1..504 | 9..512 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ubc87F-RA | 660 | CG9602-RA | 72..578 | 6..512 | 2535 | 100 | Plus |
| CG40045-RB | 868 | CG40045-RB | 427..722 | 144..439 | 310 | 74.1 | Plus |
| CG40045-RA | 740 | CG40045-RA | 299..594 | 144..439 | 310 | 74.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13717536..13718042 | 512..6 | 2535 | 100 | Minus |
| 3L | 28110227 | 3L | 24035432..24035713 | 158..439 | 270 | 73 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:01:33 has no hits.
MXO52749.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:13 Download gff for
MXO52749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9602-PA | 1..507 | 9..513 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:05 Download gff for
MXO52749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9602-RA | 68..578 | 1..512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:40 Download gff for
MXO52749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubc87F-RA | 68..578 | 1..512 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:40 Download gff for
MXO52749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13717536..13718046 | 1..512 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:05 Download gff for
MXO52749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9543258..9543768 | 1..512 | 99 | | Minus |
