MXO52758.5prime Sequence
907 bp (843 high quality bases) assembled on 2007-04-02
> MXO52758.5prime
CAGTCGACATGTCCGCGTCAGTAAGAAATACAGTCACTAGCCAAGAAAAT
GGGAGTATCTTTAAACGGTCCAGTAACTTAGACAACGAACTCAAAAAGAA
GTCCGTGGTGGTTAATCAGACACAAGCCGAAGAGTCTAAGGCTAAGAAGA
AAGATACTACGCACTATTACAGTGTGGAAACACTTGCCGACCTGCAGTAT
CGATCTCAGATAAAGGTTTTGGAAAAGATCTATGGCGAGGAGGTTGATAT
GACACCTAAGTCGATCCAAGATGACACCTATGTGGAGCAGTTCATGAAGT
ACAACCTAAATGTCATGCACCAAATGACTAACTTCACTACAATGGTAGCG
AAGAGCACGACCAGATCCCGCACGCGGTCTAGTGTTCGGGCCGGAATAGG
CGGCAATAAGCAGTCCATTGACGACCTGATGAACGGGATACTTTATGAAA
CTATTAACTGGGAACCGTACAGCACTGTTGAGGCTCTCGAAGAGGCGTAC
GAGCCAAAGCCGTATACCAAGTCCTTTTTAAAGATCACCTTACGCAAGTC
TGACTTCTTCGAAATTCACAGCCAGACGCAGACGACGGTGGCCAAGGGAT
CGCCCGAGGGCGACGATGCGGAGCGAGACAACCGAAACTACGAGTATCTG
ACAATAGGGAAAGGCAAAATTCGCCGGCGCTCAGACAATGACGCTCAGAC
AGATACTCTGCTCTTCACCACTCGGGCAGTCAACACCATCCTCATAACCA
AGGCCACCGTCAGCTCTTACGTTTCCAACTTTGAGATGTACGACACGCTG
AACAATATCACCAAGGAGTTCGCAACAGCCACTATGAGTTCGGTAAAGGA
CCTGACCTCGGCTCTAGCGCAGACGGAGGATGCGGATACCTTTGAGGACG
ACGAGGC
MXO52758.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7051-PA | 2295 | CG7051-RA | 1..899 | 9..907 | 4495 | 100 | Plus |
| CG7051-PB | 2055 | CG7051-RB | 1..659 | 249..907 | 3295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RA | 2616 | CG7051-RA | 192..1091 | 8..907 | 4500 | 100 | Plus |
| Dic61B-RB | 2642 | CG7051-RB | 276..1117 | 66..907 | 4210 | 100 | Plus |
| Dic61B-RB | 2642 | CG7051-RB | 192..249 | 8..65 | 290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 151321..151791 | 907..437 | 2355 | 100 | Minus |
| 3L | 28110227 | 3L | 151848..152071 | 437..214 | 1120 | 100 | Minus |
| 3L | 28110227 | 3L | 152121..152272 | 217..66 | 760 | 100 | Minus |
| 3L | 28110227 | 3L | 152341..152398 | 65..8 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:08:05 has no hits.
MXO52758.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:16 Download gff for
MXO52758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-PA | 1..899 | 9..907 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:21 Download gff for
MXO52758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 187..1091 | 1..907 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:03 Download gff for
MXO52758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 187..1091 | 1..907 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:03 Download gff for
MXO52758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 151321..151790 | 438..907 | 100 | <- | Minus |
| 3L | 151848..152069 | 216..437 | 100 | <- | Minus |
| 3L | 152123..152272 | 66..215 | 100 | <- | Minus |
| 3L | 152341..152401 | 1..65 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:21 Download gff for
MXO52758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 151321..151790 | 438..907 | 100 | <- | Minus |
| arm_3L | 151848..152069 | 216..437 | 100 | <- | Minus |
| arm_3L | 152123..152272 | 66..215 | 100 | <- | Minus |
| arm_3L | 152341..152401 | 1..65 | 93 | | Minus |
