MXO52763.5prime Sequence
870 bp (759 high quality bases) assembled on 2007-04-02
> MXO52763.5prime
CAGTCGACATGTCTCTGGAGGATCCGTTTTTCGTGGTCAAGGACGAGGTA
TTCAAAGCTCTGAACAAAACCCGCGGCCTCTATCTGCGTTGGCGGGAGCT
GGGCGAGAACGGCGGAACGGAGGCTGAATGGACCACCACCGAGCTGCGTA
ACTCGCTACGGAGCATCGAGTGGGATCTCGAGGACCTCGAGGACACTATC
AGCATCGTTGAGAAGAATCCAAGCAAGTTTCGGATCGACAACCGCGAACT
CTCCAGCCGGCGCCACTTCATCGACAACACTCGCGATGAGGTCAAGCAGA
TGAAGGATAAGATGAGCCTGAACCGGAGCCGGGACAGAGACATCACCGCA
CACCAGCCGCTGCTCGACAACGATCGCCACAGCCCCAATCACAATCATTC
CATTGCCATACCCAATTCGAATTCCAACTCCAACGAGTACCATCAGCATC
CACACAACGATCGCACGTACCTCGTGGAGTGTCCCAACGGCAACTCGCTG
ATCAATAGCGGCAGTCAGGTGGCCAATACCATAGCTGGGACCATGTCGGC
GGCAGCGGCAGCAGCATCCCGCCACAGCGGCACCAAGTACTCCAAGCTGG
AGAACGCCCTGGACAGTCCCAGTCACTATGGGCAGACGCATCACGGCGGC
ATGGACAGTCCGAGTCATAGGTACGTGGGCGAAACAGTGTCCATACAGCA
GCGTATGATCCAGGGACAGGATGAGCAGCTAGACATGATCAGCGATTCGA
TTGGTACCCTCAAGACGGTCTCGCGGCAAATTGGCGTTGAGCTCGATGAG
CAGGCCGTCATGCTAGACGACTTTGGGAACGAGTTCGATACCACGGAGTC
CAAGTTGGATACGACCATGA
MXO52763.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7736-PD | 972 | Syx6-RD | 1..862 | 9..870 | 4310 | 100 | Plus |
| CG7736-PE | 1020 | Syx6-RE | 84..910 | 44..870 | 4135 | 100 | Plus |
| CG7736-PB | 681 | Syx6-RB | 1..571 | 300..870 | 2855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx6-RD | 1982 | CG7736-RD | 390..1252 | 8..870 | 4315 | 100 | Plus |
| Syx6-RB | 1361 | CG7736-RB | 175..1001 | 44..870 | 4135 | 100 | Plus |
| Syx6-RE | 1945 | CG7736-RE | 531..1357 | 44..870 | 4135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11220928..11221596 | 202..870 | 3345 | 100 | Plus |
| 2R | 25286936 | 2R | 11220464..11220621 | 44..201 | 790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:18:41 has no hits.
MXO52763.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:18 Download gff for
MXO52763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7736-PD | 1..861 | 9..869 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:18:02 Download gff for
MXO52763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RD | 385..1251 | 1..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:38 Download gff for
MXO52763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RD | 385..1251 | 1..869 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:38 Download gff for
MXO52763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11220318..11220358 | 1..43 | 93 | -> | Plus |
| 2R | 11220464..11220615 | 44..195 | 100 | <- | Plus |
| 2R | 11220922..11221595 | 196..869 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:18:02 Download gff for
MXO52763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7107823..7107863 | 1..43 | 93 | -> | Plus |
| arm_2R | 7107969..7108120 | 44..195 | 100 | <- | Plus |
| arm_2R | 7108427..7109100 | 196..869 | 99 | | Plus |
