MXO52765.5prime Sequence
792 bp (769 high quality bases) assembled on 2007-04-02
> MXO52765.5prime
CAGTCGACATGGACTGGCTATTCGCCAAGAAGATCAGCCCCGATGAGATG
CTGCGTAAGAATCAGCGGGCGCTCAACAAAGCGATGCGAGATCTGGACCG
CGAGCGGATGAAAATGGAGCAGCAGGAGAAGAAGATTATCGCGGATATCA
AGAAGATGGCCAAGGAGGGTCAAATGGATGCCGTGAAGATCATGGCCAAG
GATCTGGTGCGCACGCGGCGGTATGCCAAGAAGTTCATGCTGATGAAGGC
AAACATCCAGGCGGTGTCCCTCAAAATTCAGACGCTCAAGTCGCAGAACA
CAATGGCACAGGCCATGAAAGGTGTCACGAAGGCCATGCAGAACATGAAC
CGCCAGCTGAATCTCCCGCAAATCCAGAAGATCCTGCAGGACTTCGAGAA
ACAGTCGGAAATGATGGACATGAAGGAGGAGATGATCAACGATGCCATCG
ATGACGCCATGGAGGACGAGGGCGACGAGGAGGAGACGGATGCTGTTGTG
TCCCAGGTGCTGGACGAACTGGGTCTGCAATTGGGCGAACAGCTGGGAGA
CCTTCCTTCCGCCTCCGGTTCCCTTTCCATAGCCGGCGGCGCTGGCGCTC
AGAAAGCACAGGCTGTGGCCGCTGGTGGCGTTGGCGGCGGTGGAGCCGCC
GGCGGAGGTGGAGCTAGTGGTGGCGGCGCTGGTGGTCCGGGAGCTCCCGG
TGGCAGTGGTGCCTCATCGCCCATGTCCGATGCCGATGCGGATCTTCAGG
CGCGCCTGGATAAGCTGCGCAAGGATGCAAGCTTTCTAGACC
MXO52765.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14542-PA | 771 | CG14542-RA | 1..768 | 9..776 | 3815 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps2-RA | 1248 | CG14542-RA | 95..864 | 7..776 | 3835 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26053288..26053744 | 320..776 | 2285 | 100 | Plus |
| 3R | 32079331 | 3R | 26052915..26053231 | 7..323 | 1570 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:18:53 has no hits.
MXO52765.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:19 Download gff for
MXO52765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14542-PA | 1..771 | 9..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:18:12 Download gff for
MXO52765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| vps2-RA | 89..869 | 1..782 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:44 Download gff for
MXO52765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps2-RA | 89..869 | 1..782 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:06:44 Download gff for
MXO52765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26052909..26053229 | 1..321 | 98 | -> | Plus |
| 3R | 26053290..26053742 | 322..774 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:18:12 Download gff for
MXO52765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21878631..21878951 | 1..321 | 98 | -> | Plus |
| arm_3R | 21879012..21879464 | 322..774 | 100 | -> | Plus |
