MXO52776.5prime Sequence
219 bp (219 high quality bases) assembled on 2007-04-02
> MXO52776.5prime
CAGTCGACATGGCAGTGGCATTCTACATACCCGATCAGGCGACTCTGTTG
CGGGAGGCGGAGCAGAAGGAGCAGCAGATCCTTCGCTTGCGGGAGTCACA
GTGGAGATTCCTGGCCACCGTCGTCCTGGAAACCCTGCGCCAGTACACTT
CATGTCATCCGAAGACCGGAAGAAAGTCCGGCAAATATCGCAAGCCATCG
CAAGCAAGCTTTCTAGACC
MXO52776.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4319-PA | 198 | rpr-RA | 1..195 | 9..203 | 975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rpr-RA | 901 | CG4319-RA | 201..395 | 9..203 | 975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18398041..18398235 | 203..9 | 975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:42:36 has no hits.
MXO52776.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:23 Download gff for
MXO52776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4319-PA | 1..198 | 9..206 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:31 Download gff for
MXO52776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rpr-RA | 196..403 | 1..211 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:42 Download gff for
MXO52776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rpr-RA | 196..403 | 1..211 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:42 Download gff for
MXO52776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18398033..18398240 | 1..211 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:31 Download gff for
MXO52776.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18391133..18391340 | 1..211 | 96 | | Minus |
