Clone MXO52778 Report

Search the DGRC for MXO52778

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:527
Well:78
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG10834-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO52778.5prime Sequence

315 bp (315 high quality bases) assembled on 2007-04-02

> MXO52778.5prime
CAGTCGACATGTCCGCGGAAATCGAGGATTTGCTGAAACGCTATCAAAAC
TACCCCAATGTTTCTGGCATAATTATTTTGGACCCGTTCGCTATACCAAT
CAAGACCACCATGGAGTACACCTTGACCGTGCATTACGCGGCCTTGATCA
GCACCTTAACTTATAAGGCGGCCAAAATGATTACCAATTTGGATGCCAGC
AATGAGCTGGTGACAATACGTCTGCGCACCAAGGTTCACGAGGTGATTGT
GCTGCCCTCCGAGAACTACATCATTATTGTAGTGCAAAATCCAGGCACCG
CAAGCTTTCTAGACC

MXO52778.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG10834-PA 294 CG10834-RA 1..291 9..299 1455 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG10834-RA 443 CG10834-RA 61..351 9..299 1455 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22106954..22107244 299..9 1455 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:08:15 has no hits.

MXO52778.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:24 Download gff for MXO52778.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10834-PA 1..294 9..303 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:28 Download gff for MXO52778.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10834-RA 36..335 9..308 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:09 Download gff for MXO52778.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10834-RA 61..360 9..308 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:09 Download gff for MXO52778.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 22106945..22107244 9..308 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:28 Download gff for MXO52778.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22106945..22107244 9..308 98   Minus