MXO52780.5prime Sequence
570 bp (570 high quality bases) assembled on 2007-04-02
> MXO52780.5prime
CAGTCGACATGTCGAAGCCGACAACCCTAAAGGACGCATTGGCCAAGTGG
GAGGACCGCAATAAGCAGCCAGCCGCCACTGCCACGGAAATTGGACTTCA
GTTTCAGTATCCGCCGATCGAGAAAATGGATCCGATTCTCAATTCCCTTA
CCGAGTGCCAAAAGCTCAGCTTGTCCTCAAATATGATTGAGAAGATTACT
GGAATTTCGGGAATGAAGAACCTGAAAGTCCTGAGCCTGGCACGTAACAA
TCTTAAAACGCTCAACGGCATAGAACCACTGGCCGATACTCTGGAGGAAT
TGTGGGTCAGCTACAACAACATCGAGAAGACCAAGCCCCTGGAATCGATG
AAGGCCCTGCGTGTGTTTTACATATCCTTTAATATGATCAAGGACTGGAC
GGAGTTCATGCGCATGGGTGTTCCACCAAATCTCAGCGAGATCACATTTG
TGGGAAATCCTTTGAACGAGAACATGGACCAGTCTGCCTTCACTGCCGAG
GCAGTCCGTCGTCTGCCCAACATGAAGAAACTCGATGGGGAGCCTGTCAT
TCGTGCAAGCTTTCTAGACC
MXO52780.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10839-PA | 549 | CG10839-RA | 1..546 | 9..554 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10839-RB | 1300 | CG10839-RB | 86..632 | 8..554 | 2735 | 100 | Plus |
| CG10839-RC | 1023 | CG10839-RC | 86..632 | 8..554 | 2735 | 100 | Plus |
| CG10839-RA | 692 | CG10839-RA | 86..632 | 8..554 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15979571..15980117 | 8..554 | 2735 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:39:54 has no hits.
MXO52780.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:25 Download gff for
MXO52780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-PA | 1..549 | 9..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:16 Download gff for
MXO52780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 79..632 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:13 Download gff for
MXO52780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 79..632 | 1..554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:13 Download gff for
MXO52780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15979564..15980117 | 1..554 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:16 Download gff for
MXO52780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15979564..15980117 | 1..554 | 99 | | Plus |
