MXO52781.5prime Sequence
258 bp (258 high quality bases) assembled on 2007-04-02
> MXO52781.5prime
CAGTCGACATGTTCACCGAAACCGCTCTTGTTTCCAACTTCAATGGAGTG
ACAGAGAAGAAATCTCTTACCGGCGCCTCCACCAACCTGAAGAAGCTGCT
GAAGACCATCAAGAAGGTCTTCAAGAACTCCAAGCCTTCGAAGGAGATTC
CGATCCCCAACATCATCTACTCTTGCAATACTGAGGAGGAGCACCAGAAT
TGGCTCAACGAACAACTGGAGGCCATGGCAATCCATCTTCACGCAAGCTT
TCTAGACC
MXO52781.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:13:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12487-PA | 237 | BobA-RA | 1..234 | 9..242 | 1170 | 100 | Plus |
CG13465-PA | 237 | CG13465-RA | 8..234 | 16..242 | 1110 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
BobA-RA | 627 | CG12487-RA | 58..291 | 9..242 | 1170 | 100 | Plus |
CG13465-RA | 602 | CG13465-RA | 40..273 | 9..242 | 1125 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14945835..14946068 | 242..9 | 1170 | 100 | Minus |
3L | 28110227 | 3L | 14944059..14944292 | 242..9 | 1125 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:04:32 has no hits.
MXO52781.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:25 Download gff for
MXO52781.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12487-PA | 1..237 | 9..245 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:23 Download gff for
MXO52781.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BobA-RA | 51..297 | 1..250 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:41 Download gff for
MXO52781.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
BobA-RA | 51..297 | 1..250 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:41 Download gff for
MXO52781.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14945829..14946075 | 1..250 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:23 Download gff for
MXO52781.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14938929..14939175 | 1..250 | 96 | | Minus |