MXO52783.5prime Sequence
861 bp (231 high quality bases) assembled on 2007-04-02
> MXO52783.5prime
CAATCCACATGGATAATGGGGAGGAGACCATGTTGCGTCTGCCCAGCTAT
GCTGATCGCTATACGGACATTCCCCGGCTTATCCGATTGAAGTTCATTGC
CCAGGTCTGTCCGGAGCTAAGTGTTCTTGCCCTCGAGTTGGCCCTCAATC
ATGTGAAGACCACCTACAATGTCAAGTTGTACGACGAACTCTACAAAACA
CTGTGCGTTGAGGTGGACAGGAAGTACCCCAACCAATCCAAGGGGAACGA
ATAACTTCATACCACTGGTGGAAGCGAGCCAAGTACGTCGAGTGGCAGGG
GGAGAGTTGTGGTTCCCTATGATTCCTACTGGGTGGAGGACAACATTATG
GAGGCCACTCTGATGCTTCAGGAACTACACGCCGAACTGAACTTCAAGAA
ATCGAATTCGGGCAGCTCCTATGTGCGACGCATTCTAAAGGAGATCGGGG
ATCACCACGAGAAGAGTGGAAACTTGCATATGGCGGTCAAGTTTTATGCT
CGAGCCAGGCCCTACTGTACCATCAGCGAGAATGTCATCAATATGTTCCG
GAATCTGATTAGGGTATCAATTTATATGGAAAATTGGTGGCATGTCCTCA
CCTACATTGACCAGGCCTATCAGTATGCCTATGGCTTTGAAAATCTGGCC
CATGAGGTTCCAGCACGTCTAAGCTGCGTCGCCGGTTTGGCTCATTTGGG
CCAAAAGATATACAAGTCTGCTGCTCAATATTTCATGAGTACTCCGTATG
GGCGTTACAACTACGATAGAATCGTGGCACCCGAAGATGTTACTTTATAT
GATGGTCTTTGCGCTCTAGCCACTTTCGATCGGGAGACCTTACAGCTGAT
CGCTATCAACT
MXO52783.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4697-PA | 1095 | CSN1a-RA | 1..853 | 9..861 | 3765 | 97.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN1a-RA | 1301 | CG4697-RA | 96..949 | 8..861 | 3970 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14762860..14763713 | 8..861 | 3970 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:01:40 has no hits.
MXO52783.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:26 Download gff for
MXO52783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4697-PA | 1..853 | 9..861 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:09 Download gff for
MXO52783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 90..949 | 1..861 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:46 Download gff for
MXO52783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 90..949 | 1..861 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:46 Download gff for
MXO52783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14762854..14763713 | 1..861 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:09 Download gff for
MXO52783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14762854..14763713 | 1..861 | 97 | | Plus |
