MXO52790.5prime Sequence
702 bp (680 high quality bases) assembled on 2007-04-02
> MXO52790.5prime
CAGTCGACATGAAGGATAAGATGAGCCTGAACCGGAGCCGGGACAGAGAC
ATCACCGCACACCAGCCGCTGCTCGACAACGATCGCCACAGCCCCAATCA
CAATCATTCCATTGCCATACCCAATTCGAATTCCAACTCCAACGAGTACC
ATCAGCATCCACACAACGATCGCACGTACCTCGTGGAGTGTCCCAACGGC
AACTCGCTGATCAATAGCGGCAGTCAGGTGGCCAATACCATAGCTGGGAC
CATGTCGGCGGCAGCGGCAGCAGCATCCCGCCACAGCGGCACCAAGTACT
CCAAGCTGGAGAACGCCCTGGACAGTCCCAGTCACTATGGGCAGACGCAT
CACGGCGGCATGGACAGTCCGAGTCATAGGTACGTGGGCGAAACAGTGTC
CATACAGCAGCGTATGATCCAGGGACAGGATGAGCAGCTAGACATGATCA
GCGATTCGATTGGTACCCTCAAGACGGTCTCGCGGCAAATTGGCGTTGAG
CTCGATGAGCAGGCCGTCATGCTAGACGACTTTGGGAACGAGTTCGATAC
CACGGAGTCCAAGTTGGATACGACCATGAAGAAAGTTGCCAAAGTCTTGC
ACATGAATAATGATAAACGACAGTGGGCCGCCATTCTCATCCTATCCGGA
CTGTTATTGTTTGTGATAATTTTGTTTATTATTTTGGCAAGCTTTCTAGA
CC
MXO52790.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7736-PE | 1020 | Syx6-RE | 340..1017 | 9..686 | 3390 | 100 | Plus |
| CG7736-PB | 681 | Syx6-RB | 1..678 | 9..686 | 3390 | 100 | Plus |
| CG7736-PD | 972 | Syx6-RD | 292..969 | 9..686 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx6-RD | 1982 | CG7736-RD | 682..1359 | 9..686 | 3390 | 100 | Plus |
| Syx6-RB | 1361 | CG7736-RB | 431..1108 | 9..686 | 3390 | 100 | Plus |
| Syx6-RE | 1945 | CG7736-RE | 787..1464 | 9..686 | 3390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11221026..11221629 | 9..612 | 3020 | 100 | Plus |
| 2R | 25286936 | 2R | 11221783..11221857 | 612..686 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:53:49 has no hits.
MXO52790.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:28 Download gff for
MXO52790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7736-PD | 285..972 | 1..690 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:10 Download gff for
MXO52790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RE | 780..1475 | 1..696 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:26 Download gff for
MXO52790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RE | 780..1475 | 1..696 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:26 Download gff for
MXO52790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11221019..11221629 | 1..612 | 99 | -> | Plus |
| 2R | 11221784..11221868 | 613..696 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:10 Download gff for
MXO52790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7108524..7109134 | 1..612 | 99 | -> | Plus |
| arm_2R | 7109289..7109373 | 613..696 | 95 | | Plus |
