MXO52793.5prime Sequence
276 bp (276 high quality bases) assembled on 2007-04-02
> MXO52793.5prime
CAGTCGACATGTTGATCAAAGTGACGACCCTGACCGGCAAGGAAATCGAG
ATCGACATTGAGCCCACGGACAAGGTAGATCGCATCAAGGAGCGCGTGCA
GGAAAAGGAAGGCATTCCGCCCCAGCAACAGCGTCTTATTTTCTCCGGCA
AGCAAATGAATGACGATAAAACCGCGGCGGACTACAAAGTGCAAGGTGGA
TCCGTTCTTCACTTGGTATTGGCTCTGCGAGGAGGTGATTCAATCCTAAC
ACCTTGTGTGGCAAGCTTTCTAGACC
MXO52793.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:14:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10679-PA | 255 | Nedd8-RA | 1..252 | 9..260 | 1210 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nedd8-RB | 612 | CG10679-RB | 123..374 | 9..260 | 1230 | 99.2 | Plus |
| Nedd8-RA | 471 | CG10679-RA | 123..374 | 9..260 | 1230 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18951406..18951538 | 158..26 | 650 | 99.2 | Minus |
| 2L | 23513712 | 2L | 18951244..18951346 | 260..158 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:32:58 has no hits.
MXO52793.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:25:30 Download gff for
MXO52793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10679-PA | 1..255 | 9..264 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:28:16 Download gff for
MXO52793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nedd8-RA | 115..379 | 1..267 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:16:24 Download gff for
MXO52793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nedd8-RA | 115..379 | 1..267 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:16:24 Download gff for
MXO52793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18951239..18951346 | 158..267 | 97 | <- | Minus |
| 2L | 18951407..18951537 | 27..157 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:28:16 Download gff for
MXO52793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18951239..18951346 | 158..267 | 97 | <- | Minus |
| arm_2L | 18951407..18951537 | 27..157 | 99 | <- | Minus |
