BDGP Sequence Production Resources |
Search the DGRC for RE01453
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 14 |
Well: | 53 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG15211-RA |
Protein status: | RE01453.pep: gold |
Sequenced Size: | 1203 |
Gene | Date | Evidence |
---|---|---|
CG15211 | 2001-11-29 | Blastp of sequenced clone |
CG15211 | 2002-01-01 | Sim4 clustering to Release 2 |
CG15211 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15211 | 2008-04-29 | Release 5.5 accounting |
CG15211 | 2008-08-15 | Release 5.9 accounting |
CG15211 | 2008-12-18 | 5.12 accounting |
1203 bp (1203 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069765
> RE01453.complete AGTCAGTCGACCAGCGGCCGCCGTGGACAAAGCAACGTAACGCCAAAGCA ATCGCAGCGCAGCTCATGGATATATAGCTACAATATATAGAGTAGCTGCC GATCGACCAGCGAACATATAGAAAGCGGTGGTTATTTTTCTCATCTTATT TTATTGTGACAAAAATCGCGACAAGTGTTTAAAAATAGTTGTTGTGCCCA GCTAATAAAGTAAACTTGCCCGCCAAACTGAAACTGAAACTGAAACTGAA ACTAAGCCAAGCCAAACTATAAACAGCAACAATATGGTCGAGACCGTTGT CAATATCGAGCGCACAACAACAACAACGACGAACGGACCGCCAGGTGGAG CGAACCCGACCGTTGGCAGCGGTGGCGGCTTCTGGAGCGCCATTCGCCTC AACATCGACTATTTCCGCACCATACCGGGCATCATCAAAATTGTGGAGTT TGTGCTGGGCATCATCTGCATGGCCCTGGCAGCTCCTCCACTGGCCTCGG CCACCTCGTTCTTCATGTTCGTCATCGTCATCTCGTTCATCATCAACATT CTGCTGATCGCCGCCTATTTCCTGGGCATTCGCGAGGCCCTCAACGTGGC CGTCAACTGGATATTCTCGGAGCTGATCACCACCGCTGTGCTGACGCTGC TGTACTTCATCGGATTCATCGTCCAGCTGGCCAGATGGTCGGATGCCACG GGCAAGGGTTCCGGTTCGAATACCGCCGCCGGTGTCTTTGGACTCTTCAA TTTCCTGGCATACGCGGCGGGCACGTACTTCCTGTTCCTGGCCCACAGGT CCGGGGCTACCCACTAAGTGCAGCCAACTCAGTGACTGGATCTTAGTCTA GAGTTATTTCTAATTGTTTACAGAATAAGTGCAGATCGAGTACTTGTAAT TTTGCCTCTTTTTTTTGTACTTTTGTTTTTTGTTGTTAATTAACGTATGC AGCAGATTGACAATGGAAAGCGACATGGCTTTCTGTTTTTAATGTTATTT TTATTTAAATGGCTAACTAACGTTTAAGTCTTAAATCCACCCGCACAAGA CCATATCTACGAAAACGAGTAGGGTGGGCAGCCCATATAGTACATAACCT TTTATCATTTCATGGCGTACATATAATGATTTTGTAATTTTTTTGAAATG TATTCAATCGAGACAAAATAATATACGTAAATTAACTAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15211-RA | 1391 | CG15211-RA | 4..1191 | 3..1190 | 5895 | 99.7 | Plus |
CG15211-RC | 1397 | CG15211-RC | 90..1197 | 83..1190 | 5495 | 99.7 | Plus |
CG15211.a | 1678 | CG15211.a | 309..1416 | 83..1190 | 5495 | 99.7 | Plus |
CG15211-RC | 1397 | CG15211-RC | 4..88 | 3..87 | 425 | 100 | Plus |
CG15211.a | 1678 | CG15211.a | 58..137 | 3..82 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 10669542..10670108 | 619..1185 | 2820 | 99.8 | Plus |
chrX | 22417052 | chrX | 10664131..10664502 | 83..454 | 1845 | 99.7 | Plus |
chrX | 22417052 | chrX | 10669293..10669461 | 452..620 | 845 | 100 | Plus |
chrX | 22417052 | chrX | 10663910..10663989 | 3..82 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 10778210..10778781 | 619..1190 | 2830 | 99.7 | Plus |
X | 23542271 | X | 10772798..10773169 | 83..454 | 1845 | 99.7 | Plus |
X | 23542271 | X | 10777961..10778129 | 452..620 | 845 | 100 | Plus |
X | 23542271 | X | 10772547..10772626 | 3..82 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 10786308..10786879 | 619..1190 | 2830 | 99.6 | Plus |
X | 23527363 | X | 10780896..10781267 | 83..454 | 1845 | 99.7 | Plus |
X | 23527363 | X | 10786059..10786227 | 452..620 | 845 | 100 | Plus |
X | 23527363 | X | 10780645..10780724 | 3..82 | 400 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 4160..4265 | 1034..928 | 135 | 62 | Minus |
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 986..1098 | 1009..897 | 133 | 57.5 | Minus |
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 1152..1248 | 1006..911 | 131 | 60.8 | Minus |
Stalker4 | 7359 | Stalker4 STALKER4 7359bp | 3860..3965 | 1034..928 | 126 | 61.1 | Minus |
Stalker | 7256 | Stalker STALKER 7256bp | 3754..3859 | 1034..928 | 126 | 61.1 | Minus |
gypsy9 | 5349 | gypsy9 GYPSY9 5349bp | 740..844 | 1014..910 | 119 | 62 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10663907..10663989 | 1..82 | 98 | -> | Plus |
chrX | 10664131..10664499 | 83..451 | 91 | -> | Plus |
chrX | 10669293..10669460 | 452..619 | 100 | -> | Plus |
chrX | 10669543..10670100 | 620..1177 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RC | 1..534 | 284..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RC | 1..534 | 284..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RC | 1..534 | 284..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RC | 1..534 | 284..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RC | 1..534 | 284..817 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RA | 1..1187 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RA | 1..1187 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RA | 4..1190 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RA | 1..1187 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15211-RA | 4..1190 | 1..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10772544..10772626 | 1..82 | 98 | -> | Plus |
X | 10772798..10773166 | 83..451 | 99 | -> | Plus |
X | 10777961..10778128 | 452..619 | 100 | -> | Plus |
X | 10778211..10778777 | 620..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10772544..10772626 | 1..82 | 98 | -> | Plus |
X | 10772798..10773166 | 83..451 | 99 | -> | Plus |
X | 10777961..10778128 | 452..619 | 100 | -> | Plus |
X | 10778211..10778777 | 620..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10772544..10772626 | 1..82 | 98 | -> | Plus |
X | 10772798..10773166 | 83..451 | 99 | -> | Plus |
X | 10777961..10778128 | 452..619 | 100 | -> | Plus |
X | 10778211..10778777 | 620..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10671994..10672161 | 452..619 | 100 | -> | Plus |
arm_X | 10666577..10666659 | 1..82 | 98 | -> | Plus |
arm_X | 10666831..10667199 | 83..451 | 99 | -> | Plus |
arm_X | 10672244..10672810 | 620..1187 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10780896..10781264 | 83..451 | 99 | -> | Plus |
X | 10786059..10786226 | 452..619 | 100 | -> | Plus |
X | 10786309..10786875 | 620..1187 | 99 | Plus | |
X | 10780642..10780724 | 1..82 | 98 | -> | Plus |
Translation from 283 to 816
> RE01453.hyp MVETVVNIERTTTTTTNGPPGGANPTVGSGGGFWSAIRLNIDYFRTIPGI IKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIR EALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAG VFGLFNFLAYAAGTYFLFLAHRSGATH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15211-PE | 177 | CG15211-PE | 1..177 | 1..177 | 899 | 100 | Plus |
CG15211-PD | 177 | CG15211-PD | 1..177 | 1..177 | 899 | 100 | Plus |
CG15211-PC | 177 | CG15211-PC | 1..177 | 1..177 | 899 | 100 | Plus |
CG15211-PB | 177 | CG15211-PB | 1..177 | 1..177 | 899 | 100 | Plus |
CG15211-PA | 177 | CG15211-PA | 1..177 | 1..177 | 899 | 100 | Plus |
Translation from 283 to 816
> RE01453.pep MVETVVNIERTTTTTTNGPPGGANPTVGSGGGFWSAIRLNIDYFRTIPGI IKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIR EALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAG VFGLFNFLAYAAGTYFLFLAHRSGATH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20425-PA | 176 | GF20425-PA | 1..176 | 1..177 | 654 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18369-PA | 173 | GG18369-PA | 1..173 | 1..177 | 716 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12613-PA | 171 | GH12613-PA | 1..171 | 1..177 | 668 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15211-PE | 177 | CG15211-PE | 1..177 | 1..177 | 899 | 100 | Plus |
CG15211-PD | 177 | CG15211-PD | 1..177 | 1..177 | 899 | 100 | Plus |
CG15211-PC | 177 | CG15211-PC | 1..177 | 1..177 | 899 | 100 | Plus |
CG15211-PB | 177 | CG15211-PB | 1..177 | 1..177 | 899 | 100 | Plus |
CG15211-PA | 177 | CG15211-PA | 1..177 | 1..177 | 899 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11027-PA | 174 | GI11027-PA | 23..174 | 26..177 | 567 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14986-PA | 163 | GL14986-PA | 1..55 | 1..58 | 143 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13573-PA | 174 | GA13573-PA | 1..174 | 1..177 | 714 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11433-PA | 177 | GM11433-PA | 1..177 | 1..177 | 875 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16987-PA | 177 | GD16987-PA | 1..177 | 1..177 | 870 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15808-PA | 81 | GJ15808-PA | 23..55 | 26..58 | 135 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16321-PA | 174 | GK16321-PA | 24..174 | 24..177 | 615 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17857-PA | 177 | GE17857-PA | 1..177 | 1..177 | 881 | 98.3 | Plus |