Clone RE01666 Report

Search the DGRC for RE01666

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:16
Well:66
Vector:pFlc-1
Associated Gene/TranscriptNfI-RB
Protein status:RE01666.pep: gold
Sequenced Size:4583

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2380 2003-01-01 Sim4 clustering to Release 3
NfI 2008-04-29 Release 5.5 accounting
NfI 2008-08-15 Release 5.9 accounting
NfI 2008-12-18 5.12 accounting

Clone Sequence Records

RE01666.complete Sequence

4583 bp (4583 high quality bases) assembled on 2005-10-13

GenBank Submission: BT023941

> RE01666.complete
AGTCTATAAGCACAAGTTTTGCATAACACAGCTACTCAGTTATTGTTCCG
TGTACTAGAAATTGCCTTTATATACATACTACGTTCGATATAGACAATGC
AATAAACGATTCAATGAAAGTAACAATACCTGAGGTATGTTTATACCAGA
AACTTTAAGAGGCTGTATGATCGAGACGGACGTTTCTTCTTATTTGCAAA
CATCATCATCGGGACAGGATGAATTTCACCCTTTTATTGAGGCACTCTTA
CCGTACGTCAAATCATTTTCCTACTCTTGGTTTAATTTGCAAGCCGCCAA
ACGAAAATATTATAAGAAACATGAAAAACGTATGTCACTGGAAGAAGAAA
GACATTGTAAAGATGAACTCCAGAATGAAAAGACTGAGGTGAAGCAAAAG
TGGGCTTCCCGTCTTCTTGGAAAACTCAGAAAAGACATTACACAAGAAAG
TCGAGAGGATTTTGTGCAATCTATAATCGGGAAAAGAAAATCAATTTGTG
TTCTCTCAAACCCCGATCAAAAGGGAAAAATGAGACGAATTGACTGCTTA
AGACAGGCTGACAAAGTATGGCGGCTTGATTTGGTCATGGTTATACTCTT
CAAGGCGATTCCATTAGAAAGCACAGATGGTGAGCGGTTAGAAAAAAATC
CGGAATGTTTACATCCAGGATTATGTGTAAATCCGTACCACATTAACGTG
TCTGTTCGGGAATTGGACTTGTACTTGGCCAACTTTATAAATACTCATAA
TTCAATTAACAATACAAATACGACTTTCTCAACTACTCCGGGCGTAAGAT
CGCCACATATAACTATGTATAATCGAAGTAATGATCCAAACAGAAAAGAT
GAGGTCGCTGACATGAAAAATGATGTCGTTAAACAAAACCCATATAATGG
TGTTGTTTGTAATGATATTATTTTAGCAACTGGCGTGTTTTCTTCTCAAG
AACTGTGGACATTATCTAAAGATTTAATTTTAGATGAATCAAATGATATA
AACCTAAACTCTAGCCTTATAAAGAGGGAGAACGTTGGAGCTACCTATGA
GTGTAATACATATCAAATTAACTCTGAATCCTCAATTTCTGCTGCTCAGA
GTCTTGTTCAATCTGGGTCAATTGCGGCTAATCCGATTCCACTTGGATAT
AGCATTGATTTTATAGATCAGAGGATTACACAATTATCACAAAGTCCATT
GCCACGTACAGAAGGCCCAAACGGCGATTCCCATGATGCTAACAAAATCG
ATCAAAGTAGCTCACCGCCAATCACGAGCACTGCATCAGATAATGGCACA
AGTAGTTTTTCTTTGATCGTGAGAGCTACGGATAGCTCTATTGAAGATCC
AAAAACTTCACCCATTTCTTTGCATCGCTATACCTCTTTAAGTAGTCGGA
CGCTGGCCCAAGCTCTCCCACAACATAGTTGCTCCTTGCTACATTCGTCT
TCCACTAGTCCGACTAATACCTTATATTACCCCCAGCATAATAATACAAG
ACCATCTCAAACAACTTCCGTTGAGGAACAAAATCGTGTTGGCTCCGACA
AATATTCAACGGAGCCTCAAGATATTTCGGACTTTGTCACTTATGTTTGT
CAAGACACCAGTCATACGACAACTATAACAGGATCAGCTGAAAACCATTC
ATTTCAACACTCCCATACACTCCCACAAGGTCATGGTCATTCGCCGCATT
TTCAAATTCATCAACAGCTGCGATCTGCAAAATTAACGACTTCACCATCA
ACTCATTATCACAGTACAATGCTTCCGCCGATGCTGCCACCAATGGCTCG
ACCTGTAGCTATAATTCGCAGTAGCAGTGATCTAACCTTAGTCCAATCCC
CACCAACTTCTTTGCCACTGACAGCCCAATCTACAAGCTTGAACGACAAT
AGTTGTATAGCGAAACATAGCCTGCCAACGGATAATAGACTTGCAAGTAA
CCTTGACAACAGAAATAGCCCCAATAACACAGATGTCGTTTCACAACACG
AAATGACTGGAACTGCATCTCCTCAACCGCAATCTCACACACCGACATTA
GCGAGTCCCCAATCTTATCTGGATCCTGGGCGATGTAAGCTTTTATCAGC
TGGCTCAAACATAGGCAGAATTACAACACAAATGTATCCCTCATCAAATA
ATAGAGAATATTTTAATCACTTTCATTCGCAGCCCACATCGCTTTTGGGA
TATGCCGGCTCTATTTCTACAATGTCTGGAGTTATAAGTCCAACAGACCT
AACACTTTACTCAGCTCCAATGGCTGTATCACGTTCAAGTACCAGGACTA
GGTGGAACGAAGAGGAGCATAATGTAATTCCACAGTCTGCATCTAGTACA
AACATGGATAACACCCAAGTTATATTAATGGAAGACTCGACTGGTCGTTA
TATAGATGAGTATTCTAGTCGTGACTATGTGTCATGATGTAAACTAAATA
AGGTAAAAGTCATTAAACTCTTCGGCTTGGGCATGCCAAAATATTGATTA
GAGAATCAGTAACTAATAAGAGTACCTTAAACAGATACATAAAATCCTTT
TGCACATATATTTAAGTTTGACAATAATCGTTGTATTTAATCATAATTGA
ATGGACTCTAGGTATGCCTGTATAATAAGCTCGGTAAAAAGAATATATTA
AAGCCCATAAAGAACTATTAAGGCGTCGGAGATGTCAATATTAGAAGTCA
AATAAATTTACGGGATCTCTTATTCCTGTTAATCCTTTATTAAAAAAGGT
ATACTTGATTTGATTGAAAAAGTGTAACAAGAAGACGGAAGCTACGTCTA
CCCTATAAAGTATATCTACTCTTAACCAATAAAACCAATAGCCGAGTCGA
TCTGGCCATGTCCGTCTGTCCGAACATCGAGATATGGAAAACTATAAGAG
CTAGAAAGTTGAGACTAGAAATGCCGACTCTTGTGACGCCAACGCTGCTC
ATATTTACTTCAGTACGACCACTCTAAAACCACAAGCGATTTCGGTATCT
CAGCAATCTAAAGACTTTTTTTTAGATTTGATAAGTTTACACAATTTTTT
TTTCTAATATTTAATACAGATCCAAACTTAAATACTTACGACAAAATTAT
TTCGGATATCATGAACTTTTATTAACCAATAAGTTATAGGCAGGAAGTCA
TATCTAATATTGGATTTTAATTTAATTTTTAGGACGTTATAACATATAAT
AATATATCAAGATGTGAGCGAAATATCTCCAAATAGTGGGTTATTAGTTG
TCAATAAATCTTTATAAGCCAGAGGCCGAAATGGATTTATTTGAAACATA
CAGTGCTACTGTAAGCTGCTAATAATTTTGTACTTATGAAACCAGAACGA
AATCGCTTTTAATTTTTACTCATTTCACAATTTGTATCAAAGATTCTCCT
ACTTACCTCCCTATTTTTACTTTTAGAACAATATATAATATTTCAATTCA
AGTACAAAAAATAATAGACACGTATTGAAATTCCCAGGCTACCACAGTCA
GACTATGACACAGTATTAAATATACTAATGCTCTGTGGCTTTTTCGATTT
GTCTAGAATTTTTTTAGGAATCCGTTTGTGATTTATAAAGATAAAATCCT
GTCAACCACTGTATGAAAATAGTACCAGCGTTGCCATGCAAATAAAAAAC
ATTAAACACAAAGCAACCAAAATTCTAATCATATTTTACGCATGTAAGCT
ACATATTTAATTATTATTATTTTATTTTAATGCTTAAGAATTTTCAAATT
TAAATGGAATATTAAATGGCATATTTAAGCAATATGTTACTTAAGGTTGC
TGTGGAATTTTATTATAAAAAAATTTAATTTAACCTTAGGCTTTAGATGA
TGGTTAAATTTACTTAACTTTTGAAAAAAGTAGTATATATAAGGAATTTA
ATATTATGAACATAATTACACTGGGCACCAGTCGTCGCCTATTTTATTTA
TATTAAGTGAAGAAGACAAATTTTAAATAATAGTACATTTTTGATCGACC
CGATGATGATTACGACCCGTAAATCATCAAACATTTTTTTAATTTGATTT
TGTTATGCAAGTTGAAATTATAGAGAATGTAAGAATACAGTTCTAATAAG
TGCCTAAAATGTTATTAAAATATTCAAATTAAAAGCCGTAATAATACTTA
TAAGCCAGCATAATTTTTATTTTGAAATAGATCTTTGCAAGGTCCACTCA
ATTGGTCAAAATAAGTGGACATCTATTTCAAAAAAGTTAATTCTTGTAAC
TAAAAGTTTTAGCAATGGCTAAATTTTTTTCAATCAAAAGATTTTAGCTC
CATAAGAGAAATGTAAATTTACGAATGTGCGCTGCATTGTAATTGTGAGT
TCCAGAACAAAACAAATACAAATATAAAATGTTAGTACAATAATAATATT
AGATAGATGGCAAAAAGCATGTGCAGACACATAAAATATAAAAAACTATT
TATAAGATTTGGCTGTGAATATAATTATTACGCTAACGCTATATATAAGT
TAGGGTAAAACGAAAGTGCTTATTACAAAAAAAGATAATATTGTAATAAA
ATATCAATATATACACCCCACTTAAAAAAAAAA

RE01666.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:27:06
Subject Length Description Subject Range Query Range Score Percent Strand
NfI-RB 4767 NfI-RB 134..4709 1..4576 22850 99.9 Plus
NfI.a 3940 NfI.a 98..2550 1..2453 12250 99.9 Plus
NfI.a 3940 NfI.a 2548..3940 3181..4573 6950 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:36:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr4 1351717 chr4 288888..291073 4573..2388 10915 100 Minus
chr4 1351717 chr4 291643..292423 2191..1411 3905 100 Minus
chr4 1351717 chr4 293689..294288 971..372 3000 100 Minus
chr4 1351717 chr4 292489..292746 1412..1155 1290 100 Minus
chr4 1351717 chr4 291134..291330 2387..2191 970 99.5 Minus
chr4 1351717 chr4 292800..292984 1154..970 925 100 Minus
chr4 1351717 chr4 294335..294492 373..216 790 100 Minus
chr4 1351717 chr4 296153..296293 218..78 705 100 Minus
chr4 1351717 chr4 296865..296941 77..1 385 100 Minus
chrU 10048995 chrU 1678803..1678877 2840..2914 195 84 Plus
chr3L 24539361 chr3L 100402..100482 2918..2838 195 82.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:24:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 268311..270499 4576..2388 10930 100 Minus
4 1348131 4 271069..271849 2191..1411 3905 100 Minus
4 1348131 4 273115..273714 971..372 3000 100 Minus
4 1348131 4 271915..272172 1412..1155 1290 100 Minus
4 1348131 4 270560..270756 2387..2191 970 99.5 Minus
4 1348131 4 272226..272410 1154..970 925 100 Minus
4 1348131 4 273761..273918 373..216 790 100 Minus
4 1348131 4 275579..275719 218..78 705 100 Minus
4 1348131 4 276291..276367 77..1 385 100 Minus
3R 32079331 3R 1671139..1671213 2914..2840 195 84 Minus
3L 28110227 3L 100442..100522 2918..2838 195 82.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:18:31
Subject Length Description Subject Range Query Range Score Percent Strand
4 1331231 4 268311..270499 4576..2388 10930 99.9 Minus
4 1331231 4 271069..271849 2191..1411 3905 100 Minus
4 1331231 4 273115..273714 971..372 3000 100 Minus
4 1331231 4 271915..272172 1412..1155 1290 100 Minus
4 1331231 4 270560..270756 2387..2191 970 99.4 Minus
4 1331231 4 272226..272410 1154..970 925 100 Minus
4 1331231 4 273761..273918 373..216 790 100 Minus
4 1331231 4 275579..275719 218..78 705 100 Minus
4 1331231 4 276291..276367 77..1 385 100 Minus
3R 31820162 3R 4645434..4645503 2906..2836 195 87.3 Minus
3R 31820162 3R 1468717..1468791 2914..2840 195 84 Minus
3L 28103327 3L 100442..100522 2918..2838 195 82.7 Minus
Blast to na_te.dros performed 2019-03-15 22:36:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\ISBu2 726 Dbuz\ISBu2 ISBU2 726bp 31..423 2746..3120 362 59.9 Plus
INE-1 611 INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). 10..196 2752..2927 361 69 Plus
Dfun\Isfun-1 928 Dfun\Isfun-1 DFU309320 928bp Derived from AJ309320 (Rel. 68, Last updated, Version 1). 17..141 2748..2872 275 71.1 Plus
Dsub\SGM 823 Dsub\SGM SGM 823bp Derived from AF043638. 1..160 2718..2872 259 65.6 Plus
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 1309..1441 2878..2742 252 67.2 Minus
Dpse\mini-me 4622 Dpse\mini-me DPSEMINIME 4622bp 30..162 2748..2872 233 66.9 Plus
Dsub\GEM 1730 Dsub\GEM GEM 1730bp 982..1137 2871..2720 223 64.4 Minus
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 3013..3150 2924..2785 209 63.1 Minus
Dvir\Penelope 4158 Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). 3940..4035 2872..2773 195 69.6 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6797..7156 3639..4003 170 56.8 Plus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1055..1368 4562..4237 166 55.3 Minus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 6394..6489 3902..3806 140 61.9 Minus
opus 7521 opus OPUS 7521bp 6156..6247 4359..4454 137 63.5 Plus
Dm88 4558 Dm88 DM88 4558bp 865..1024 340..499 132 57.7 Plus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1069..1193 4480..4357 127 56.8 Minus
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 5893..6327 3968..4395 125 53.6 Plus
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 2496..2664 4520..4367 124 60 Minus
roo 9092 roo DM_ROO 9092bp 3846..3880 4528..4562 121 82.9 Plus
gypsy6 7826 gypsy6 GYPSY6 7826bp 5754..5818 4457..4392 120 66.7 Minus

RE01666.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:37:29 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
chr4 296154..296293 78..217 100 <- Minus
chr4 296865..296941 1..77 100   Minus
chr4 294335..294490 218..373 100 <- Minus
chr4 288888..290473 2988..4573 96 == Minus
chr4 290742..291073 2388..2719 100 <- Minus
chr4 291134..291329 2192..2387 99 <- Minus
chr4 291643..292421 1413..2191 100 <- Minus
chr4 292489..292746 1155..1412 100 <- Minus
chr4 292800..292982 972..1154 100 <- Minus
chr4 293689..294286 374..971 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:45:57 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 1..2301 137..2437 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:48:35 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 1..2301 137..2437 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:26:42 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 1..2301 137..2437 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:29:43 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 1..2301 137..2437 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:29:38 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 1..2301 137..2437 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:21:42 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 1..4573 1..4573 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:48:35 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 1..4573 1..4573 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:26:42 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 3..4575 1..4573 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:29:44 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 1..4573 1..4573 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:29:38 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
NfI-RB 3..4575 1..4573 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:37:29 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
4 275580..275719 78..217 100 <- Minus
4 276291..276367 1..77 100   Minus
4 268314..270499 2388..4573 99 <- Minus
4 270560..270755 2192..2387 99 <- Minus
4 271069..271847 1413..2191 100 <- Minus
4 271915..272172 1155..1412 100 <- Minus
4 272226..272408 972..1154 100 <- Minus
4 273115..273712 374..971 100 <- Minus
4 273761..273916 218..373 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:37:29 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
4 275580..275719 78..217 100 <- Minus
4 276291..276367 1..77 100   Minus
4 268314..270499 2388..4573 99 <- Minus
4 270560..270755 2192..2387 99 <- Minus
4 271069..271847 1413..2191 100 <- Minus
4 271915..272172 1155..1412 100 <- Minus
4 272226..272408 972..1154 100 <- Minus
4 273115..273712 374..971 100 <- Minus
4 273761..273916 218..373 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:37:29 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
4 275580..275719 78..217 100 <- Minus
4 276291..276367 1..77 100   Minus
4 268314..270499 2388..4573 99 <- Minus
4 270560..270755 2192..2387 99 <- Minus
4 271069..271847 1413..2191 100 <- Minus
4 271915..272172 1155..1412 100 <- Minus
4 272226..272408 972..1154 100 <- Minus
4 273115..273712 374..971 100 <- Minus
4 273761..273916 218..373 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:26:42 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 288940..291125 2388..4573 99 <- Minus
arm_4 291186..291381 2192..2387 99 <- Minus
arm_4 291695..292473 1413..2191 100 <- Minus
arm_4 292541..292798 1155..1412 100 <- Minus
arm_4 292852..293034 972..1154 100 <- Minus
arm_4 293741..294338 374..971 100 <- Minus
arm_4 294387..294542 218..373 100 <- Minus
arm_4 296206..296345 78..217 100 <- Minus
arm_4 296917..296993 1..77 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:08:09 Download gff for RE01666.complete
Subject Subject Range Query Range Percent Splice Strand
4 270560..270755 2192..2387 99 <- Minus
4 268314..270499 2388..4573 99 <- Minus
4 271069..271847 1413..2191 100 <- Minus
4 271915..272172 1155..1412 100 <- Minus
4 272226..272408 972..1154 100 <- Minus
4 273115..273712 374..971 100 <- Minus
4 273761..273916 218..373 100 <- Minus
4 275580..275719 78..217 100 <- Minus
4 276291..276367 1..77 100   Minus

RE01666.pep Sequence

Translation from 136 to 2436

> RE01666.pep
MFIPETLRGCMIETDVSSYLQTSSSGQDEFHPFIEALLPYVKSFSYSWFN
LQAAKRKYYKKHEKRMSLEEERHCKDELQNEKTEVKQKWASRLLGKLRKD
ITQESREDFVQSIIGKRKSICVLSNPDQKGKMRRIDCLRQADKVWRLDLV
MVILFKAIPLESTDGERLEKNPECLHPGLCVNPYHINVSVRELDLYLANF
INTHNSINNTNTTFSTTPGVRSPHITMYNRSNDPNRKDEVADMKNDVVKQ
NPYNGVVCNDIILATGVFSSQELWTLSKDLILDESNDINLNSSLIKRENV
GATYECNTYQINSESSISAAQSLVQSGSIAANPIPLGYSIDFIDQRITQL
SQSPLPRTEGPNGDSHDANKIDQSSSPPITSTASDNGTSSFSLIVRATDS
SIEDPKTSPISLHRYTSLSSRTLAQALPQHSCSLLHSSSTSPTNTLYYPQ
HNNTRPSQTTSVEEQNRVGSDKYSTEPQDISDFVTYVCQDTSHTTTITGS
AENHSFQHSHTLPQGHGHSPHFQIHQQLRSAKLTTSPSTHYHSTMLPPML
PPMARPVAIIRSSSDLTLVQSPPTSLPLTAQSTSLNDNSCIAKHSLPTDN
RLASNLDNRNSPNNTDVVSQHEMTGTASPQPQSHTPTLASPQSYLDPGRC
KLLSAGSNIGRITTQMYPSSNNREYFNHFHSQPTSLLGYAGSISTMSGVI
SPTDLTLYSAPMAVSRSSTRTRWNEEEHNVIPQSASSTNMDNTQVILMED
STGRYIDEYSSRDYVS*

RE01666.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:47:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21690-PA 762 GF21690-PA 1..762 1..766 2635 66.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:47:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16454-PA 766 GG16454-PA 1..766 1..766 3730 92.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23980-PA 805 GH23980-PA 1..805 1..766 2497 63.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:44
Subject Length Description Subject Range Query Range Score Percent Strand
NfI-PB 766 CG2380-PB 1..766 1..766 3996 100 Plus
NfI-PC 762 CG2380-PC 1..762 1..766 3956 99.3 Plus
CG46026-PA 666 CG46026-PA 226..645 348..752 170 21.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:47:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14107-PA 838 GI14107-PA 1..838 1..765 2241 59.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18152-PA 787 GL18152-PA 1..787 1..766 2864 71.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24981-PA 95 GA24981-PA 11..95 686..766 326 77.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26787-PA 765 GM26787-PA 1..765 1..766 3759 95.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:47:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24387-PA 445 GD24387-PA 1..432 1..429 2164 95.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:47:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21334-PA 798 GJ21334-PA 1..798 1..766 2412 62.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:47:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13608-PA 787 GK13608-PA 1..787 1..766 2323 63.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14520-PA 767 GE14520-PA 1..767 1..766 3658 91 Plus

RE01666.hyp Sequence

Translation from 136 to 2436

> RE01666.hyp
MFIPETLRGCMIETDVSSYLQTSSSGQDEFHPFIEALLPYVKSFSYSWFN
LQAAKRKYYKKHEKRMSLEEERHCKDELQNEKTEVKQKWASRLLGKLRKD
ITQESREDFVQSIIGKRKSICVLSNPDQKGKMRRIDCLRQADKVWRLDLV
MVILFKAIPLESTDGERLEKNPECLHPGLCVNPYHINVSVRELDLYLANF
INTHNSINNTNTTFSTTPGVRSPHITMYNRSNDPNRKDEVADMKNDVVKQ
NPYNGVVCNDIILATGVFSSQELWTLSKDLILDESNDINLNSSLIKRENV
GATYECNTYQINSESSISAAQSLVQSGSIAANPIPLGYSIDFIDQRITQL
SQSPLPRTEGPNGDSHDANKIDQSSSPPITSTASDNGTSSFSLIVRATDS
SIEDPKTSPISLHRYTSLSSRTLAQALPQHSCSLLHSSSTSPTNTLYYPQ
HNNTRPSQTTSVEEQNRVGSDKYSTEPQDISDFVTYVCQDTSHTTTITGS
AENHSFQHSHTLPQGHGHSPHFQIHQQLRSAKLTTSPSTHYHSTMLPPML
PPMARPVAIIRSSSDLTLVQSPPTSLPLTAQSTSLNDNSCIAKHSLPTDN
RLASNLDNRNSPNNTDVVSQHEMTGTASPQPQSHTPTLASPQSYLDPGRC
KLLSAGSNIGRITTQMYPSSNNREYFNHFHSQPTSLLGYAGSISTMSGVI
SPTDLTLYSAPMAVSRSSTRTRWNEEEHNVIPQSASSTNMDNTQVILMED
STGRYIDEYSSRDYVS*

RE01666.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:09:57
Subject Length Description Subject Range Query Range Score Percent Strand
NfI-PB 766 CG2380-PB 1..766 1..766 3996 100 Plus
NfI-PC 762 CG2380-PC 1..762 1..766 3956 99.3 Plus
CG46026-PA 666 CG46026-PA 226..645 348..752 170 21.9 Plus