BDGP Sequence Production Resources |
Search the DGRC for RE01689
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 16 |
Well: | 89 |
Vector: | pFlc-1 |
Associated Gene/Transcript | tgy-RD |
Protein status: | RE01689.pep: wuzgold |
Preliminary Size: | 1310 |
Sequenced Size: | 1627 |
Gene | Date | Evidence |
---|---|---|
CG7440 | 2001-11-29 | Blastp of sequenced clone |
CG7440 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7440 | 2003-01-01 | Sim4 clustering to Release 3 |
tgy | 2008-04-29 | Release 5.5 accounting |
tgy | 2008-08-15 | Release 5.9 accounting |
tgy | 2008-12-18 | 5.12 accounting |
1627 bp (1627 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069768
> RE01689.complete AGTGTTTCAATGGCCGGGGAATATATCATACTGGAGAACTCGTCGACTTA TCCGGGCTTCCATTCCAGTTCCAACGGATTGGCGAATGGCATGTACCGCT CCGCCCAGCGCATCTCCACCGATCGCCTGGTCCTGCTCATTCTGCTGGTG AGCACCACGGTGATCGGGCTGTTTGCCTACTGGGATGTAATGGTGCTCAA CGCCGGCGCACTGCCACTGTCCAGAGGCACTAGCTCTGTTGATTACATGG AGCCTGGACTGCGCAACGAAACCCTGGCCGAGAAGATGCATCGGGAGGTG AGAGTCCTGTGCTGGGTGCTCACCACACCCAAATACCACAAGACCCGGGC CATTCACGTTTTGCGAACGTGGGGCAAACGCTGCAATAAGATCTACTTCA TGACCTCTGAGCCGGATGACGAGCTGCCCACCGTTGTGCTGACCAAGCCG GACCGATACGAGATGCTGTGGGGCAAGACCAAAGAGGCCTTTGTCCACAT CCACGAGCAGATGCGCCACGAGGCGGATTGGTTCATAAAGGCGGACGACG ACACGTATGTGAAAGATTCAGATTCTTAAATAGGGAAAGAGTGGCATTTT ATTGCAGGAATTGATAAGTGAATGGATGGTTGTTTCGTCACCACAGATAC ACGTACATATGTATATATGTATGTATGTATTTATTGAACATTATTATCAT TCTGTTTTACCTTTGTGGTGTAACTACTGATGGTATCTCAATGTTAGGGC CACAGCCAAAACAGTTGAATGAAGAATAATTAGGAACCGATAAAGAAAAG ATAGCATTATTAAAGTTTGACTGAACTTTCAATCTGCTCCTATCAATAGC TACCTCTTTTTGGAAAATCTGCGCTACATGCTCTACCCGTATTCACCGGA GACACCTATTTATTTTGGATTTAATTACAAGATGGTCGGCACTCACCAGA AGAACGAGTCATACATGTCCGGCGGCAGTGGCTACGTACTGAGCCGCGAG GCTCTTAGGATCTTCGCCGAGGGCGTCAACGACACCACCAAGTGTCGCCA GGAGGACGATCACGCCGAGGACGTCGAGATGGGCAAGTGCCTGTTCAACC TGGGCGTGAAGGCGGGTGATTCCAGGGACGAGCAGCTGCGCAACCGCTTC TATCCCATAGCTCCTTATGGAGCCCTTCTCTCGGGCAACGTTGGCATGGA CTTTTGGTTGTACAAGTACGCCTACTACAATCCGAGATCGTGCATGGACT GCCTGTCGGAGTACCCGGTGGCCTTTCACTATGTGCACAGCAAGCAGCTG TACGTGTACGACTACTTCAACTACCAGTTCCAGCTCTCCGGAAGGGCGCA GGTGGCGGAACGGCTGCCCAAGAAGATCCGGGAGGAGGAGCTGGTCATCC CCGAGAGCGACAATCCGGTGTCCTAGGCAGGAGCCAGCCATTCTGCCACT TCAGCAGCAGCAATCTCAAGTCCATATCTACATATTTTCCATCCTTTTTT TTTTGTGTGTGCTTATCGTGTATTTAATATATTATGGGCACAAGGCGAAC GTGCCAAGGCTGCCAGATGCTGTCCTGTTGCGACTCCTTGTCCTTGCCCG ATCCACGTCCTAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tgy-RD | 1812 | tgy-RD | 1..1613 | 1..1612 | 8025 | 99.9 | Plus |
tgy.a | 1916 | tgy.a | 564..1326 | 850..1612 | 3815 | 100 | Plus |
tgy-RC | 1817 | tgy-RC | 785..1547 | 850..1612 | 3815 | 100 | Plus |
tgy.a | 1916 | tgy.a | 10..563 | 1..554 | 2770 | 100 | Plus |
tgy-RC | 1817 | tgy-RC | 231..784 | 1..554 | 2770 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19015211..19016169 | 958..1 | 4580 | 98.7 | Minus |
chrX | 22417052 | chrX | 19014123..19014496 | 1611..1240 | 1790 | 99.2 | Minus |
chrX | 22417052 | chrX | 19014862..19015145 | 1240..957 | 1405 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 19126355..19127313 | 958..1 | 4745 | 99.9 | Minus |
X | 23542271 | X | 19125273..19125645 | 1612..1240 | 1865 | 100 | Minus |
X | 23542271 | X | 19126006..19126289 | 1240..957 | 1420 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19134453..19135411 | 958..1 | 4755 | 99.8 | Minus |
X | 23527363 | X | 19133371..19133743 | 1612..1240 | 1865 | 100 | Minus |
X | 23527363 | X | 19134104..19134387 | 1240..957 | 1420 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Galileo | 2304 | Dbuz\Galileo GALILEO 2304bp | 743..796 | 676..625 | 130 | 74.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19014862..19015143 | 959..1240 | 99 | <- | Minus |
chrX | 19014123..19014495 | 1241..1611 | 99 | <- | Minus |
chrX | 19015211..19016169 | 1..958 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RC | 1..545 | 10..554 | 100 | == | Plus |
tgy-RC | 546..1122 | 850..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RC | 1..545 | 10..554 | 100 | == | Plus |
tgy-RC | 546..1122 | 850..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RC | 1..545 | 10..554 | 100 | == | Plus |
tgy-RC | 546..1122 | 850..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RC | 1..545 | 10..554 | 100 | == | Plus |
tgy-RC | 546..1122 | 850..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RC | 1..545 | 10..554 | 100 | == | Plus |
tgy-RC | 546..1122 | 850..1426 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RD | 1..1612 | 1..1611 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RD | 1..1612 | 1..1611 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RD | 1..1612 | 1..1611 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RD | 1..1612 | 1..1611 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
tgy-RC | 4..557 | 1..554 | 100 | == | Plus |
tgy-RC | 558..1319 | 850..1611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19126006..19126287 | 959..1240 | 100 | <- | Minus |
X | 19126355..19127313 | 1..958 | 99 | Minus | |
X | 19125274..19125644 | 1241..1611 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19126006..19126287 | 959..1240 | 100 | <- | Minus |
X | 19126355..19127313 | 1..958 | 99 | Minus | |
X | 19125274..19125644 | 1241..1611 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19126006..19126287 | 959..1240 | 100 | <- | Minus |
X | 19126355..19127313 | 1..958 | 99 | Minus | |
X | 19125274..19125644 | 1241..1611 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19019307..19019677 | 1241..1611 | 100 | <- | Minus |
arm_X | 19020039..19020320 | 959..1240 | 100 | <- | Minus |
arm_X | 19020388..19021346 | 1..958 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19133372..19133742 | 1241..1611 | 100 | <- | Minus |
X | 19134104..19134385 | 959..1240 | 100 | <- | Minus |
X | 19134453..19135411 | 1..958 | 99 | Minus |
Translation from 0 to 578
> RE01689.pep SVSMAGEYIILENSSTYPGFHSSSNGLANGMYRSAQRISTDRLVLLILLV STTVIGLFAYWDVMVLNAGALPLSRGTSSVDYMEPGLRNETLAEKMHREV RVLCWVLTTPKYHKTRAIHVLRTWGKRCNKIYFMTSEPDDELPTVVLTKP DRYEMLWGKTKEAFVHIHEQMRHEADWFIKADDDTYVKDSDS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16008-PA | 358 | GF16008-PA | 1..168 | 4..187 | 576 | 59.8 | Plus |
Dana\GF15693-PA | 390 | GF15693-PA | 89..186 | 89..186 | 311 | 55.1 | Plus |
Dana\GF14913-PA | 452 | GF14913-PA | 68..191 | 65..187 | 305 | 48.4 | Plus |
Dana\GF24418-PA | 341 | GF24418-PA | 8..150 | 44..187 | 245 | 33.3 | Plus |
Dana\GF14985-PA | 384 | GF14985-PA | 78..173 | 92..187 | 239 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18081-PA | 374 | GG18081-PA | 1..185 | 4..187 | 780 | 83.2 | Plus |
Dere\GG24047-PA | 388 | GG24047-PA | 88..185 | 89..186 | 317 | 57.1 | Plus |
Dere\GG10669-PA | 453 | GG10669-PA | 57..184 | 57..187 | 300 | 45 | Plus |
Dere\GG24890-PA | 386 | GG24890-PA | 76..173 | 90..187 | 284 | 51 | Plus |
Dere\GG14746-PA | 339 | GG14746-PA | 49..151 | 85..187 | 243 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25080-PA | 308 | GH25080-PA | 19..176 | 44..187 | 323 | 41.8 | Plus |
Dgri\GH23406-PA | 327 | GH23406-PA | 45..143 | 89..187 | 319 | 56.6 | Plus |
Dgri\GH25083-PA | 339 | GH25083-PA | 30..128 | 89..187 | 314 | 55.6 | Plus |
Dgri\GH25082-PA | 347 | GH25082-PA | 45..142 | 89..186 | 313 | 56.1 | Plus |
Dgri\GH10852-PA | 339 | GH10852-PA | 30..128 | 89..187 | 311 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tgy-PE | 373 | CG7440-PE | 1..184 | 4..187 | 974 | 99.5 | Plus |
tgy-PC | 373 | CG7440-PC | 1..184 | 4..187 | 974 | 99.5 | Plus |
C1GalTA-PA | 388 | CG9520-PA | 88..185 | 89..186 | 321 | 57.1 | Plus |
C1GalTA-PC | 388 | CG9520-PC | 88..185 | 89..186 | 321 | 57.1 | Plus |
C1GalTA-PB | 388 | CG9520-PB | 88..185 | 89..186 | 321 | 57.1 | Plus |
CG8708-PC | 444 | CG8708-PC | 77..174 | 89..186 | 293 | 54.1 | Plus |
CG8708-PD | 450 | CG8708-PD | 83..180 | 89..186 | 293 | 54.1 | Plus |
CG8708-PB | 450 | CG8708-PB | 83..180 | 89..186 | 293 | 54.1 | Plus |
CG2975-PA | 385 | CG2975-PA | 74..170 | 90..186 | 277 | 50.5 | Plus |
CG34057-PB | 344 | CG34057-PB | 54..156 | 85..187 | 249 | 44.7 | Plus |
CG34057-PA | 355 | CG34057-PA | 65..167 | 85..187 | 249 | 44.7 | Plus |
CG34056-PA | 341 | CG34056-PA | 10..148 | 43..187 | 233 | 35.9 | Plus |
CG18558-PB | 588 | CG18558-PB | 309..409 | 89..186 | 232 | 45.5 | Plus |
CG2983-PB | 344 | CG2983-PB | 72..161 | 99..187 | 219 | 48.9 | Plus |
CG3119-PB | 184 | CG3119-PB | 62..150 | 101..187 | 209 | 46.1 | Plus |
CG3119-PA | 355 | CG3119-PA | 62..150 | 101..187 | 209 | 46.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15728-PA | 376 | GI15728-PA | 33..185 | 27..187 | 483 | 56.4 | Plus |
Dmoj\GI12045-PA | 391 | GI12045-PA | 71..186 | 71..186 | 321 | 51.7 | Plus |
Dmoj\GI12912-PA | 264 | GI12912-PA | 37..137 | 87..187 | 307 | 53.5 | Plus |
Dmoj\GI17446-PA | 390 | GI17446-PA | 65..175 | 73..186 | 306 | 51.8 | Plus |
Dmoj\GI12068-PA | 352 | GI12068-PA | 43..141 | 89..187 | 296 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14674-PA | 303 | GL14674-PA | 3..124 | 60..187 | 500 | 72.1 | Plus |
Dper\GL25549-PA | 390 | GL25549-PA | 88..185 | 89..186 | 313 | 57.1 | Plus |
Dper\GL26713-PA | 452 | GL26713-PA | 91..189 | 89..187 | 306 | 55.6 | Plus |
Dper\GL15447-PA | 379 | GL15447-PA | 80..174 | 92..187 | 280 | 52.1 | Plus |
Dper\GL15448-PA | 597 | GL15448-PA | 296..417 | 71..187 | 267 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20354-PA | 369 | GA20354-PA | 1..180 | 4..187 | 554 | 58.6 | Plus |
Dpse\GA21851-PA | 390 | GA21851-PA | 88..185 | 89..186 | 313 | 57.1 | Plus |
Dpse\GA29031-PA | 452 | GA29031-PA | 91..189 | 89..187 | 306 | 55.6 | Plus |
Dpse\GA28803-PA | 347 | GA28803-PA | 80..174 | 92..187 | 281 | 52.1 | Plus |
Dpse\GA14990-PA | 597 | GA14990-PA | 296..417 | 71..187 | 268 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22770-PA | 373 | GM22770-PA | 1..184 | 4..187 | 934 | 93.5 | Plus |
Dsec\GM12650-PA | 379 | GM12650-PA | 79..176 | 89..186 | 316 | 57.1 | Plus |
Dsec\GM20714-PA | 446 | GM20714-PA | 86..184 | 89..187 | 293 | 53.5 | Plus |
Dsec\GM18370-PA | 383 | GM18370-PA | 78..172 | 93..187 | 276 | 50.5 | Plus |
Dsec\GM14364-PA | 335 | GM14364-PA | 45..147 | 85..187 | 243 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24465-PA | 373 | GD24465-PA | 1..184 | 4..187 | 943 | 94.6 | Plus |
Dsim\GD22375-PA | 388 | GD22375-PA | 88..185 | 89..186 | 317 | 57.1 | Plus |
Dsim\GD10181-PA | 446 | GD10181-PA | 86..184 | 89..187 | 292 | 53.5 | Plus |
Dsim\GD23186-PA | 386 | GD23186-PA | 78..172 | 93..187 | 276 | 51.6 | Plus |
Dsim\GD22797-PA | 588 | GD22797-PA | 309..410 | 89..187 | 233 | 46.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15256-PA | 373 | GJ15256-PA | 35..186 | 29..187 | 511 | 60.6 | Plus |
Dvir\GJ14135-PA | 386 | GJ14135-PA | 71..186 | 71..186 | 308 | 49.1 | Plus |
Dvir\GJ14139-PA | 441 | GJ14139-PA | 80..178 | 89..187 | 306 | 55.6 | Plus |
Dvir\GJ14138-PA | 335 | GJ14138-PA | 51..147 | 91..187 | 305 | 56.7 | Plus |
Dvir\GJ13625-PA | 339 | GJ13625-PA | 3..147 | 42..187 | 254 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25098-PA | 373 | GK25098-PA | 1..182 | 4..187 | 521 | 54.8 | Plus |
Dwil\GK24754-PA | 403 | GK24754-PA | 81..179 | 89..187 | 326 | 58.6 | Plus |
Dwil\GK24753-PA | 440 | GK24753-PA | 86..184 | 89..187 | 311 | 56.6 | Plus |
Dwil\GK14790-PA | 390 | GK14790-PA | 71..186 | 71..186 | 310 | 50.9 | Plus |
Dwil\GK14791-PA | 371 | GK14791-PA | 71..186 | 71..186 | 309 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15477-PA | 375 | GE15477-PA | 1..186 | 4..187 | 818 | 82.3 | Plus |
Dyak\GE10709-PA | 388 | GE10709-PA | 88..185 | 89..186 | 317 | 57.1 | Plus |
Dyak\GE23251-PA | 451 | GE23251-PA | 86..184 | 89..187 | 297 | 54.5 | Plus |
Dyak\GE18184-PA | 385 | GE18184-PA | 74..171 | 90..187 | 278 | 51 | Plus |
Dyak\GE21108-PA | 339 | GE21108-PA | 49..151 | 85..187 | 238 | 43.7 | Plus |
Translation from 0 to 578
> RE01689.hyp SVSMAGEYIILENSSTYPGFHSSSNGLANGMYRSAQRISTDRLVLLILLV STTVIGLFAYWDVMVLNAGALPLSRGTSSVDYMEPGLRNETLAEKMHREV RVLCWVLTTPKYHKTRAIHVLRTWGKRCNKIYFMTSEPDDELPTVVLTKP DRYEMLWGKTKEAFVHIHEQMRHEADWFIKADDDTYVKDSDS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
tgy-PE | 373 | CG7440-PE | 1..184 | 4..187 | 974 | 99.5 | Plus |
tgy-PC | 373 | CG7440-PC | 1..184 | 4..187 | 974 | 99.5 | Plus |
C1GalTA-PA | 388 | CG9520-PA | 88..185 | 89..186 | 321 | 57.1 | Plus |
C1GalTA-PC | 388 | CG9520-PC | 88..185 | 89..186 | 321 | 57.1 | Plus |
C1GalTA-PB | 388 | CG9520-PB | 88..185 | 89..186 | 321 | 57.1 | Plus |