Clone RE01856 Report

Search the DGRC for RE01856

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:18
Well:56
Vector:pFlc-1
Associated Gene/TranscriptCG5873-RA
Protein status:RE01856.pep: gold
Sequenced Size:3091

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5873 2003-01-01 Sim4 clustering to Release 3
CG5873 2005-01-26 Blastp of sequenced clone
CG5873 2008-04-29 Release 5.5 accounting
CG5873 2008-08-15 Release 5.9 accounting
CG5873 2008-12-18 5.12 accounting

Clone Sequence Records

RE01856.complete Sequence

3091 bp (3091 high quality bases) assembled on 2005-01-26

GenBank Submission: BT021336

> RE01856.complete
GTCGGTTAATTGTTGGACACACTCCGTGGCGGTTGTGCAGGCGGAAAAAA
GAAAAAGAAATCGAGGCCCTTTCGTGTGAGTGAGTGAGTGTGCAGGAAAC
AAAGTGCATTGGAAAAGAGGTTGAAATTAGTGACAAAAGGGTGAAACCCG
ATAGTAAAACTTACCCGCAGTCGCGACAAGTGTTCGTTACTCGGTAAATT
CTGGCACCAAACAAAAGACTTAGGCAACGAACTCTTTTGTAAACTCCCCG
CGACTCCGTTCGTTATTTATTGAGGCCAACTAAGCGTGGGTCATCGTCTG
CTATAATTGGAATAATTCACAGCTTAAGTATTTGCTAACCAAACATAAGC
AAAATCCTACCCATATACCCAACGCATTTCGAGACTTCATTAAAAACGGC
GGCCAACGGCCAAGTGGCAACGTGCAACGTCAACAAAATGATCTTAAGAA
TACTTCTACTGTCACTGGCGGCGGTGGCGCACGCGCAGTACCATCAGTTT
GGTGAGCAACTCCAGACGGCCCACGGATCCGACTGTGCACTTCTGTTGGC
CGGACCCGGTCGCTCCTCCGTCTACGACTACAATGTGAATCTATTTCGCG
GCACTTTAAACCCGTACAACAATGGACCGGGCACTTGCATCACCTACGAT
GCCATCAATGCGGCCTACTTGGATGCACGCAAGCGTATTCATGTGGCGCA
GCCAAAGTCTGACTGGAAGCCGGAGGAACTGGCCACCGTGGGCGAGCTGC
TGCTCGACATTTCCATTCAATTGGCCCGAACATATGGCTTATCGTATGAA
GAAATCGAAAAAGGATTACCTACGATTGATACCTCAAAGACGCTGATTCG
TGAGGTGTGTCCACCCTTCTTCGCTGGAGTTGAGTGTCGCCCTGGAAAAT
ATCGCCGTTTCGATGGCCTTTGCAACAACATCGAGCACCCGACATGGGGG
GCAGCTAATGCTCCGTTCCAGCGCCTGATCGGTCCACTTTACTCGGACGG
AATCAATGCTCCCAGAATTTCGGTGACTGGTCGGGATTTGCCCTTCTCTC
GAGTGGTTTCACGCACCATGCATCCCGACGACGGTTTCCACGATCACGCG
GGCACCGTTATGGTCATCGCCTGGGGTCAGTTCATGGATCACGACTTCAC
GCTGACGGGAACGCCGTTGGATCCCATTAACCGTAACGATCCCGAGGAGT
GCTGCAAGCGACCATTGCATCTAAAGCATCCGTACTGCAATGAGATTCGC
ATTCCCGATGACGATTACTTCTATCGCCTGTTTAATGTCAAGTGCATTGA
CTTCGTGCGTGGATTCCCCTCTCCTCGTCCAGGCTGCAAATTAGGCTCCC
GTCAGCAGTTCAACACCTTGACTGGTGTCATCGATGCGAACACCGTTTAC
GGAGTGAAGGAGTCGTTTGCCCGCAAGCTAAGAACTGGCTACGGAGGTCT
GATGCGCATGAATCCCGTGTTCCAGGAGTACGGCCTGAAGGACCTGCTTC
CCCTGAAGCTGGATATCCCCGACGAGGGATGCACGCGTCCCAACAAGAGC
ATGTACTGTTTCGAGGGCGGTGAGATTCGCGTGAATGAGCAGCTGGTGCT
CACGTGCATGCACACCTTGATGGCGCGAGAGCACAATCGACTGGCGACTG
CATTGGCGCAGATTAACAAACACTGGGATGATGAGACGCTGTTCCAGGAG
GCCAGACGCATCAATATCGCCATAGTTCAGCATGTCACCTTCAACGAATT
TCTGCCCATTCTGCTGGGCAAGGAAGTGATGGAGAAGTTCGGTTTGGTGC
TCCAGAAAGATGGCTACTGGGATGGTTATGATTCAACAGTGAATCCGGGC
ATTATTGACTCTTTTGCTGGAGCTGCCTTCCGATTTGGCCACTCTCTGTT
GCCAACTGCCGTGGAACGCTGGTCCAAGGCCCACAAGTTTATTGCCTCGA
AACGTCTGTCGGATTTGATCAGGAGACCCTATGATCTGTACCGTGCAGGA
GTGCTGGATGAATATTTCATGGGTCTGATGAACCAAGTGGCCCAGGCAAT
GGACGACTCGATAACCCAGGAGGTCACCAATCATCTGTTCAAGAAGGAGG
GCGCCCGGTTTGGAATGGATCTGGTGTCGTTTAATATGCAGCGCGGTCGG
GAGTTTGGTATTCCCGGTTACATGGAGTTCCGAAAATTCTGCGGTCTGCC
CACCTCAAACACCTGGGATGAGATGTACGGATCCATGCCCAACGAGACTG
TTCTGCGCTATGGCAGCATTTTTGAACACCCTGCCGATATTGATCTTTGG
TCTGGAGGCGTCTCTGAAAAATCACTTCCCGGTTCCATGTTGGGACCGAC
TTTTGCCTGTGTTATCGCCACCCAGATGAGTTACCTGCGTCGTGGAGATC
GCTTTTGGTACGAGCTGCCCAACCAGCCCTCATCATTTACGCCCGAGCAA
CTGCAGGAGATTCGCAAGGCGAAGCTATCCCGATTGATCTGCGACAACAC
CGACTTGATTGATACTGTGCAAATCTACCCCATGGTCTTGCCGGATCATG
AAATCAACCCACGAGTGCCCTGTAAGAGCGGTATTATACCATCAATTGAT
CTGACTAAATGGGCGGACTTTGGCGGTCATGGCGTAGATCCCTCTCTCTA
TAACTACATCAATGAAATACCCGACACGTTGCTGAACTTTAGGAAGTAAA
TGCCATTTGTTTTTCTCACGATTTGTTTTACAATCTCGATTCATTTTGTT
TGACTCCATATCCTGTACCGTCTGTCTTCTATAGTTCAAAATCTTTTCAC
TTCTTACTGCTTAGTCCCTCAACTAGTCTTTGCTCACCATCCGCATTTCT
ATAGCGAGTCAGTAGTTATGACACTGCCATTTCTTCAGAGCTCTTTCCAG
CATTTCCGTGCATGAACCATACATTCTGTATATATTAATATTAAATAGCA
GAAATAGAGCCTTTAAGTTAAAGCATATCGAAGCAATCAAAAAAAAGAAA
ACATAAATAATTTTAAAAATATATCTCGATGTAAGTTTTTGTATATGCAA
GTATTTTTTAAATAAAATTTAAAACCAAAAAAAAAAAAAAA

RE01856.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG5873-RA 3179 CG5873-RA 114..3179 5..3070 15315 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 13268954..13269886 1343..2275 4560 99.2 Plus
chr3R 27901430 chr3R 13250123..13250564 5..448 2095 98.6 Plus
chr3R 27901430 chr3R 13270449..13270870 2652..3074 2035 99.3 Plus
chr3R 27901430 chr3R 13268117..13268505 782..1170 1930 99.7 Plus
chr3R 27901430 chr3R 13269942..13270220 2276..2554 1395 100 Plus
chr3R 27901430 chr3R 13268682..13268857 1170..1345 850 98.9 Plus
chr3R 27901430 chr3R 13260254..13260414 447..607 805 100 Plus
chr3R 27901430 chr3R 13270285..13270381 2555..2651 485 100 Plus
chr3R 27901430 chr3R 13265662..13265752 691..781 455 100 Plus
chr3R 27901430 chr3R 13265304..13265386 608..690 415 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:25:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:16:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17444581..17445513 1343..2275 4665 100 Plus
3R 32079331 3R 17425777..17426220 5..448 2205 99.8 Plus
3R 32079331 3R 17446075..17446501 2652..3078 2120 99.8 Plus
3R 32079331 3R 17443744..17444132 782..1170 1945 100 Plus
3R 32079331 3R 17445569..17445847 2276..2554 1395 100 Plus
3R 32079331 3R 17444309..17444484 1170..1345 880 100 Plus
3R 32079331 3R 17435904..17436064 447..607 805 100 Plus
3R 32079331 3R 17445911..17446007 2555..2651 485 100 Plus
3R 32079331 3R 17441289..17441379 691..781 455 100 Plus
3R 32079331 3R 17440931..17441013 608..690 415 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:34:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 17185412..17186344 1343..2275 4665 100 Plus
3R 31820162 3R 17166608..17167051 5..448 2205 99.7 Plus
3R 31820162 3R 17186906..17187332 2652..3078 2120 99.7 Plus
3R 31820162 3R 17184575..17184963 782..1170 1945 100 Plus
3R 31820162 3R 17186400..17186678 2276..2554 1395 100 Plus
3R 31820162 3R 17185140..17185315 1170..1345 880 100 Plus
3R 31820162 3R 17176735..17176895 447..607 805 100 Plus
3R 31820162 3R 17186742..17186838 2555..2651 485 100 Plus
3R 31820162 3R 17182120..17182210 691..781 455 100 Plus
3R 31820162 3R 17181762..17181844 608..690 415 100 Plus
Blast to na_te.dros performed 2019-03-15 16:16:47
Subject Length Description Subject Range Query Range Score Percent Strand
transib3 2883 transib3 TRANSIB3 2883bp 2628..2703 2931..3006 128 63.2 Plus

RE01856.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:17:38 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 13250118..13250564 1..448 98 -> Plus
chr3R 13260256..13260414 449..607 100 -> Plus
chr3R 13265304..13265386 608..690 100 -> Plus
chr3R 13265662..13265752 691..781 100 -> Plus
chr3R 13268117..13268505 782..1170 99 -> Plus
chr3R 13268683..13268856 1171..1344 98 -> Plus
chr3R 13268956..13269886 1345..2275 99 -> Plus
chr3R 13269942..13270220 2276..2554 100 -> Plus
chr3R 13270285..13270381 2555..2651 100 -> Plus
chr3R 13270449..13270842 2652..3046 93 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:56:31 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 1..2262 438..2699 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:13:01 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 1..2262 438..2699 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:58:42 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 1..2262 438..2699 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:57:33 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 1..2262 438..2699 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:32:22 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 1..2262 438..2699 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:56:30 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 1..3071 1..3070 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:13:01 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 1..3071 1..3070 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:58:42 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 5..3081 1..3076 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:57:33 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 1..3071 1..3070 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:32:22 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
CG5873-RA 5..3081 1..3076 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:17:38 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17435906..17436064 449..607 100 -> Plus
3R 17440931..17441013 608..690 100 -> Plus
3R 17441289..17441379 691..781 100 -> Plus
3R 17444310..17444483 1171..1344 100 -> Plus
3R 17443744..17444132 782..1170 100 -> Plus
3R 17425772..17426220 1..448 99 -> Plus
3R 17444583..17445513 1345..2275 100 -> Plus
3R 17445569..17445847 2276..2554 100 -> Plus
3R 17445911..17446007 2555..2651 100 -> Plus
3R 17446075..17446499 2652..3076 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:17:38 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17435906..17436064 449..607 100 -> Plus
3R 17440931..17441013 608..690 100 -> Plus
3R 17441289..17441379 691..781 100 -> Plus
3R 17444310..17444483 1171..1344 100 -> Plus
3R 17443744..17444132 782..1170 100 -> Plus
3R 17425772..17426220 1..448 99 -> Plus
3R 17444583..17445513 1345..2275 100 -> Plus
3R 17445569..17445847 2276..2554 100 -> Plus
3R 17445911..17446007 2555..2651 100 -> Plus
3R 17446075..17446499 2652..3076 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:17:38 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17435906..17436064 449..607 100 -> Plus
3R 17440931..17441013 608..690 100 -> Plus
3R 17441289..17441379 691..781 100 -> Plus
3R 17444310..17444483 1171..1344 100 -> Plus
3R 17443744..17444132 782..1170 100 -> Plus
3R 17425772..17426220 1..448 99 -> Plus
3R 17444583..17445513 1345..2275 100 -> Plus
3R 17445569..17445847 2276..2554 100 -> Plus
3R 17445911..17446007 2555..2651 100 -> Plus
3R 17446075..17446499 2652..3076 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:58:42 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13251494..13251942 1..448 99 -> Plus
arm_3R 13261628..13261786 449..607 100 -> Plus
arm_3R 13266653..13266735 608..690 100 -> Plus
arm_3R 13267011..13267101 691..781 100 -> Plus
arm_3R 13269466..13269854 782..1170 100 -> Plus
arm_3R 13270032..13270205 1171..1344 100 -> Plus
arm_3R 13270305..13271235 1345..2275 100 -> Plus
arm_3R 13271291..13271569 2276..2554 100 -> Plus
arm_3R 13271633..13271729 2555..2651 100 -> Plus
arm_3R 13271797..13272221 2652..3076 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:32:57 Download gff for RE01856.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17166603..17167051 1..448 99 -> Plus
3R 17176737..17176895 449..607 100 -> Plus
3R 17181762..17181844 608..690 100 -> Plus
3R 17182120..17182210 691..781 100 -> Plus
3R 17184575..17184963 782..1170 100 -> Plus
3R 17185141..17185314 1171..1344 100 -> Plus
3R 17185414..17186344 1345..2275 100 -> Plus
3R 17186400..17186678 2276..2554 100 -> Plus
3R 17186742..17186838 2555..2651 100 -> Plus
3R 17186906..17187330 2652..3076 99   Plus

RE01856.pep Sequence

Translation from 437 to 2698

> RE01856.pep
MILRILLLSLAAVAHAQYHQFGEQLQTAHGSDCALLLAGPGRSSVYDYNV
NLFRGTLNPYNNGPGTCITYDAINAAYLDARKRIHVAQPKSDWKPEELAT
VGELLLDISIQLARTYGLSYEEIEKGLPTIDTSKTLIREVCPPFFAGVEC
RPGKYRRFDGLCNNIEHPTWGAANAPFQRLIGPLYSDGINAPRISVTGRD
LPFSRVVSRTMHPDDGFHDHAGTVMVIAWGQFMDHDFTLTGTPLDPINRN
DPEECCKRPLHLKHPYCNEIRIPDDDYFYRLFNVKCIDFVRGFPSPRPGC
KLGSRQQFNTLTGVIDANTVYGVKESFARKLRTGYGGLMRMNPVFQEYGL
KDLLPLKLDIPDEGCTRPNKSMYCFEGGEIRVNEQLVLTCMHTLMAREHN
RLATALAQINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLGKEVMEK
FGLVLQKDGYWDGYDSTVNPGIIDSFAGAAFRFGHSLLPTAVERWSKAHK
FIASKRLSDLIRRPYDLYRAGVLDEYFMGLMNQVAQAMDDSITQEVTNHL
FKKEGARFGMDLVSFNMQRGREFGIPGYMEFRKFCGLPTSNTWDEMYGSM
PNETVLRYGSIFEHPADIDLWSGGVSEKSLPGSMLGPTFACVIATQMSYL
RRGDRFWYELPNQPSSFTPEQLQEIRKAKLSRLICDNTDLIDTVQIYPMV
LPDHEINPRVPCKSGIIPSIDLTKWADFGGHGVDPSLYNYINEIPDTLLN
FRK*

RE01856.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16408-PA 753 GF16408-PA 1..753 1..753 4028 98.4 Plus
Dana\GF15059-PA 1393 GF15059-PA 681..1282 122..727 1026 38.5 Plus
Dana\GF17004-PA 836 GF17004-PA 220..796 153..727 975 38.2 Plus
Dana\GF23048-PA 1440 GF23048-PA 6..557 154..725 969 39.1 Plus
Dana\GF23081-PA 809 GF23081-PA 207..807 123..725 953 36.2 Plus
Dana\GF15059-PA 1393 GF15059-PA 64..560 150..725 573 29.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22254-PA 753 GG22254-PA 1..753 1..753 4058 99.5 Plus
Dere\GG21118-PA 1394 GG21118-PA 719..1283 155..727 1017 39 Plus
Dere\GG11159-PA 830 GG11159-PA 216..790 153..727 984 39.1 Plus
Dere\GG11318-PA 1487 GG11318-PA 60..611 154..725 966 39 Plus
Dere\GG22459-PA 809 GG22459-PA 207..807 123..725 951 36.3 Plus
Dere\GG21118-PA 1394 GG21118-PA 64..561 150..725 577 29 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:58:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13532-PA 753 GH13532-PA 1..753 1..753 3870 95.5 Plus
Dgri\GH18450-PA 1390 GH18450-PA 6..576 154..751 1044 38.8 Plus
Dgri\GH11214-PA 1394 GH11214-PA 716..1283 155..727 1020 38.7 Plus
Dgri\GH19219-PA 833 GH19219-PA 224..797 154..727 989 39 Plus
Dgri\GH19555-PA 691 GH19555-PA 100..675 150..727 911 34.2 Plus
Dgri\GH11214-PA 1394 GH11214-PA 61..558 150..725 561 28.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
cysu-PA 753 CG5873-PA 1..753 1..753 4055 100 Plus
CG42331-PD 1615 CG42331-PD 117..735 89..727 1024 37 Plus
CG42331-PB 1615 CG13632-PA 117..735 89..727 1024 37 Plus
cd-PA 830 CG6969-PA 217..776 154..713 1014 40.4 Plus
CG42331-PC 1439 CG6879-PA 6..559 154..727 1010 39.2 Plus
CG10211-PB 1394 CG10211-PB 719..1283 155..727 1002 38.8 Plus
CG10211-PA 1394 CG10211-PA 719..1283 155..727 1002 38.8 Plus
Pxt-PB 809 CG7660-PB 237..807 155..725 926 37 Plus
Pxd-PC 688 CG3477-PC 98..685 150..738 890 34.5 Plus
Pxd-PB 690 CG3477-PB 100..687 150..738 890 34.5 Plus
Pxd-PA 690 CG3477-PA 100..687 150..738 890 34.5 Plus
Pxn-PE 1527 CG12002-PE 772..1367 150..747 866 34.6 Plus
Pxn-PD 1527 CG12002-PD 772..1367 150..747 866 34.6 Plus
Pxn-PC 1527 CG12002-PC 772..1367 150..747 866 34.6 Plus
Pxn-PA 1527 CG12002-PA 772..1367 150..747 866 34.6 Plus
CG4009-PC 649 CG4009-PC 95..642 155..727 719 31.3 Plus
CG4009-PB 649 CG4009-PB 95..642 155..727 719 31.3 Plus
CG10211-PB 1394 CG10211-PB 64..561 150..725 560 29.3 Plus
CG10211-PA 1394 CG10211-PA 64..561 150..725 560 29.3 Plus
Duox-PC 1537 CG3131-PC 70..581 156..690 444 26.8 Plus
Duox-PB 1537 CG3131-PB 70..581 156..690 444 26.8 Plus
Irc-PB 697 CG8913-PB 215..674 229..690 417 28 Plus
Irc-PA 697 CG8913-PA 215..674 229..690 417 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:58:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24789-PA 753 GI24789-PA 1..753 1..753 3873 95.8 Plus
Dmoj\GI24027-PA 1472 GI24027-PA 23..599 130..725 1035 38.6 Plus
Dmoj\GI14135-PA 1394 GI14135-PA 716..1283 155..727 1034 40.2 Plus
Dmoj\GI22008-PA 843 GI22008-PA 231..805 154..727 996 38.5 Plus
Dmoj\GI23851-PA 687 GI23851-PA 96..671 150..727 908 34.2 Plus
Dmoj\GI14135-PA 1394 GI14135-PA 61..558 150..725 577 28.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:58:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23577-PA 774 GL23577-PA 24..774 3..753 3991 97.6 Plus
Dper\GL23247-PA 832 GL23247-PA 216..790 153..727 971 39.2 Plus
Dper\GL13626-PA 716 GL13626-PA 6..572 154..735 954 38.1 Plus
Dper\GL22623-PA 1534 GL22623-PA 772..1366 150..747 886 35 Plus
Dper\GL24545-PA 691 GL24545-PA 100..686 150..737 874 33.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19195-PA 774 GA19195-PA 24..774 3..753 3989 97.6 Plus
Dpse\GA10160-PA 1397 GA10160-PA 719..1286 155..727 1024 38.8 Plus
Dpse\GA19993-PB 656 GA19993-PB 40..614 153..727 975 39.2 Plus
Dpse\GA19993-PA 832 GA19993-PA 216..790 153..727 975 39.2 Plus
Dpse\GA28057-PA 812 GA28057-PA 216..810 130..725 938 36.5 Plus
Dpse\GA10160-PA 1397 GA10160-PA 64..561 150..725 566 28.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15237-PA 594 GM15237-PA 1..588 1..588 3173 99.8 Plus
Dsec\GM17279-PA 1394 GM17279-PA 719..1283 155..727 1020 39 Plus
Dsec\GM26459-PA 827 GM26459-PA 215..775 153..713 999 40.5 Plus
Dsec\GM26626-PA 1495 GM26626-PA 70..613 154..725 960 39 Plus
Dsec\GM15259-PA 809 GM15259-PA 237..807 155..725 946 36.9 Plus
Dsec\GM17279-PA 1394 GM17279-PA 64..561 150..725 576 28.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19162-PA 753 GD19162-PA 1..753 1..753 4064 99.7 Plus
Dsim\GD24141-PA 1394 GD24141-PA 719..1283 155..727 1019 39 Plus
Dsim\GD20977-PA 827 GD20977-PA 215..775 153..713 1007 40.5 Plus
Dsim\GD21129-PA 1443 GD21129-PA 6..557 154..725 977 39.5 Plus
Dsim\GD19183-PA 809 GD19183-PA 237..807 155..725 954 37.3 Plus
Dsim\GD24141-PA 1394 GD24141-PA 64..561 150..725 578 29.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24437-PA 756 GJ24437-PA 8..756 5..753 3846 95.6 Plus
Dvir\GJ17765-PA 1397 GJ17765-PA 719..1286 155..727 1037 40 Plus
Dvir\GJ23657-PA 1446 GJ23657-PA 6..557 154..725 1024 39 Plus
Dvir\GJ10461-PA 837 GJ10461-PA 222..796 154..727 1010 38.3 Plus
Dvir\GJ10566-PA 692 GJ10566-PA 101..680 150..731 913 34.5 Plus
Dvir\GJ17765-PA 1397 GJ17765-PA 62..561 150..725 560 28.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11651-PA 753 GK11651-PA 1..753 1..753 3972 96.8 Plus
Dwil\GK24383-PA 1458 GK24383-PA 718..1285 155..727 1017 38.5 Plus
Dwil\GK14038-PA 1415 GK14038-PA 6..557 154..725 975 38.1 Plus
Dwil\GK22657-PA 804 GK22657-PA 208..802 130..725 961 37.4 Plus
Dwil\GK22572-PA 2521 GK22572-PA 219..734 153..668 960 39.2 Plus
Dwil\GK24383-PA 1458 GK24383-PA 62..559 150..725 554 29.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25475-PA 753 GE25475-PA 1..753 1..753 4058 99.6 Plus
Dyak\GE13192-PA 1394 GE13192-PA 719..1283 155..727 1020 39.3 Plus
Dyak\GE10324-PA 830 GE10324-PA 216..776 153..713 980 40.1 Plus
Dyak\GE23514-PA 1448 GE23514-PA 6..557 154..725 977 39.1 Plus
Dyak\GE25495-PA 809 GE25495-PA 207..807 123..725 943 36.5 Plus
Dyak\GE13192-PA 1394 GE13192-PA 64..561 150..725 572 29.1 Plus

RE01856.hyp Sequence

Translation from 437 to 2698

> RE01856.hyp
MILRILLLSLAAVAHAQYHQFGEQLQTAHGSDCALLLAGPGRSSVYDYNV
NLFRGTLNPYNNGPGTCITYDAINAAYLDARKRIHVAQPKSDWKPEELAT
VGELLLDISIQLARTYGLSYEEIEKGLPTIDTSKTLIREVCPPFFAGVEC
RPGKYRRFDGLCNNIEHPTWGAANAPFQRLIGPLYSDGINAPRISVTGRD
LPFSRVVSRTMHPDDGFHDHAGTVMVIAWGQFMDHDFTLTGTPLDPINRN
DPEECCKRPLHLKHPYCNEIRIPDDDYFYRLFNVKCIDFVRGFPSPRPGC
KLGSRQQFNTLTGVIDANTVYGVKESFARKLRTGYGGLMRMNPVFQEYGL
KDLLPLKLDIPDEGCTRPNKSMYCFEGGEIRVNEQLVLTCMHTLMAREHN
RLATALAQINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLGKEVMEK
FGLVLQKDGYWDGYDSTVNPGIIDSFAGAAFRFGHSLLPTAVERWSKAHK
FIASKRLSDLIRRPYDLYRAGVLDEYFMGLMNQVAQAMDDSITQEVTNHL
FKKEGARFGMDLVSFNMQRGREFGIPGYMEFRKFCGLPTSNTWDEMYGSM
PNETVLRYGSIFEHPADIDLWSGGVSEKSLPGSMLGPTFACVIATQMSYL
RRGDRFWYELPNQPSSFTPEQLQEIRKAKLSRLICDNTDLIDTVQIYPMV
LPDHEINPRVPCKSGIIPSIDLTKWADFGGHGVDPSLYNYINEIPDTLLN
FRK*

RE01856.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:06:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG5873-PA 753 CG5873-PA 1..753 1..753 4055 100 Plus
CG42331-PD 1615 CG42331-PD 117..735 89..727 1024 37 Plus
CG42331-PB 1615 CG13632-PA 117..735 89..727 1024 37 Plus
cd-PA 830 CG6969-PA 217..776 154..713 1014 40.4 Plus
CG42331-PC 1439 CG6879-PA 6..559 154..727 1010 39.2 Plus