Clone RE01954 Report

Search the DGRC for RE01954

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:19
Well:54
Vector:pFlc-1
Associated Gene/Transcriptrow-RA
Protein status:RE01954.pep: gold
Sequenced Size:4408

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8092 2004-08-13 Blastp of sequenced clone
CG8092 2008-04-29 Release 5.5 accounting
CG8092 2008-08-15 Release 5.9 accounting
CG8092 2008-12-18 5.12 accounting

Clone Sequence Records

RE01954.complete Sequence

4408 bp (4408 high quality bases) assembled on 2004-08-13

GenBank Submission: BT016036

> RE01954.complete
ACTCAAGCAGGTACATCCACGCAAGGAAAGCTAATTCGAGCGAAAAAAAA
TTTACTTAGCTCTTAATATTTTTAAAAACAACGCCCTCGCTGGGCCAGTG
GTCGGTTAACTAGTTAGCTGTAAGATGACGCGCGTAACGAGAAGTGAAAT
CTCCCTGGACATGGAGTTCTGGGTGGAGGAGCTGTCGCCGGCACAATTGG
CGTACTACGAGAAGATTACTAACGAGCACAACGCGGTGAAGGGTGCACTA
AAGAACGCGGTTAGCGCCAACGAGGGCAAGGAGCTGTTTAACGGCCAGGT
GTTCCAGGCCTACTCCTTTAAGGGCAAAGTGCTGCAGGAGCTCAAGGAGG
CTACGCTGCCCAAAAAACCACCCAAGCCGACGGACTCTCCCTCAACACCC
GCCGCCCAAAGCGGTGGCACAGGGCGGGGTCGTGGCCGCCCACCACGACA
ACCATCCAACATCGCCTACCTGGAGTCCTCCGATGAGGGAGACGACGATA
TGCCGCTGGCCAAGCGACTGGCGCTGTCTGCAGGCAAAAAAGCAGTGGCC
GTGGCCAATGCATCTTCCTCGTTCACCCCGAAATCCAGTAAGAAGGCTGC
ATCCGCTGCTAGTGGAGGATCTTCTTCACCGGTACCTAAGAGCAGTGGAA
AACTATTTAAGGAATCCAAACCGGACATCGAATCGCCGCCGAAGAACTAC
CGCCCCGCCGAGGTTAACTCGGTGGGCGGTCTGGTGGTGGGCAGCACCGA
CGAAAGCAAGGATAGCAAAGACGGCAAGGATGGCAAGGATAACAAGATGC
AAGGAAAGACATATCCATCTCTGGTGGTGCTAGCAAAGCCTTTTCTCAAG
ATCAAAGACATGGCTGCCACCCGCAGCAAGCTGGACTCGAAGGTTAAGCT
GGTGCTCATGCTTACGCCCAATAAATTCTGCGAGTGGCTGCTCCAGGAGG
GATTGCTACGCGCTCAACAGCATTGCATAAACCATCGCAACAACGAGCTC
AAATTGGGAATTTATTCGGATGTGACCAAGTTTCCCTACACTGGTGGCTA
TGTGTGGATCAGCGAATGTTGCCCCTACCGCTTCGTCTCCGTGTTCAACA
ATTCCATTTTCGAAGGAGCTCAGCACCCACCCACATTCCTGTTGAAGTTA
ATTTACCACTGGGCTTGCCAGACCAGTATTCAAAATGTGGTGCAGTGGGT
TAAGGTGGACAGTGTTTATATCAAAGGAATCTACACCTGGCTTAGAGCCA
TTTGCACTTTGGCAGTGCATCAAAAATGCAAGAAGCTGGGCGGTCCCGGC
AAGTTTGTGGAGGTGGGTGTTATTTCCCTAGGAACCACATCCCAAGATGG
CTCCCAGCGACAAGTGAAAGTTGAGGTTCTGGGCGTCTATGATTATGCGG
AGAAGTCCATCCGACTGCGGGCTGTAGAGCCAATCACCGATGGTGATCGT
AACTACAAAAAGCGATTCCAGGCCATTCTTGAGCCACTGTCGCGCTGGGT
GCACAAGGACAGCACCATTTGTATAGACTTGACTGTCGACAAGATCACCC
TCTTCAGCATGGGATTCAAAAATATTGTCCAAGCAGCTGCCACTGACAAC
ACAGCCAAGCACAACAACTCAGCGGTAATGGAATATTTGCGACGGATTGT
GCCGCGCATGTTCCAGAACACCCTATCGTTGCTATCTCGCCAGATGATTC
AACAATTCCTCGACGAGTTGGTATGGCGAGAGTCCTTTGGTACATATGCC
TTGCAGGCATTCAACAATATCATAATACACATTGCCGAGCAGACAAGAGT
AACCACCAATGAGACAATCACTCAGCGTCTGTATCAGGTGGCAACCAATC
CGTTCAAGGACTGGAGTATTTTGCCGGCCAACTACAAGGAGACACCTGCC
AATGCTGCTCCCAAGCGCCTCAAGAAACCTATCAACGATGCTGACTACGT
TGTTTCTAACAAGATTCCCAAGAAGGAAAAGGATCGTGATATAGCATCAT
CTGGAGTCAAGCGCGGCCGTCCACCGAATGCATTAGGCACCCCACCACCT
CAATTGCCAATTAAAAAGGGTCCAGGTCGGCCGCCGGGCAGTACCAACCA
GACAAAAGGAGACAGAGCAACGACCTCGTCATCTAAATCACTGTCTAAAT
CTCTGATAGCTAAAGGCCTTGGTAAAAAACCGAAAGAAAAAGATGAAAAG
ATTCCAATGGTCATTAAGAAAGAAGAGGATGATCTAAGGGGCTTGGAGGA
GCTGTACTATGGAATAAGTGATGGTACGGACGAGTACCACGAGATCTTTC
CATATAGCACACCCCGTACGGTTCACAACGAACTGGCCAAGACCGTGGAG
TGTCCAATCTGCCTGAACGGCGACTCCTTCGATTCCAATGAGAAACTCCA
AACGCATTTAGTATCGCATATTTCGCCAGAGGGTAAGCAGCACCAGTTCC
AGTGCCTTTTTTGCTTGGAGAAGCATCCCACCGAGTCGGTTTTGGCCAAA
CACAACCAGATCATGCATCCAACTGAGACAAAAACGGAGGGTTCACCCTC
GTACTACTGCCTAATATGCCAGCAGCGTCACAATTCCCTGCATCTGTTGA
CGGCTCATTTGCAGAAGGTCCACAGCACCCTGGAACTACCATATTGGTGT
CACTCCTGCGGCTATCGATCATCTTCGCACCGCGATTTGGTCAGGCATTT
TTATGACGACCACAAGCATCAAAACTTTTTACAGTGCCCCTATTGCTTGG
ATATTTTCTACTTCTCAAAGCTTGGCGTCGTTAACCAGCTGCGCATAGAA
CATTACTTCATGCATTTGGACGAGCACATCAACAAGCGTGATCCCTCGCT
GCGCTGCCAGAAATGCTCGCTATCCTTCCTCGAGAAGGGGGATCTAAAGC
AGCACGCAGTGCAGCATCATGTGAGCATGACTAAGACCAATAGACCGGTG
CGTCTCTTACTCAACAACTCGATGTTGATACCACCGCCAAAGATTCGCAC
CCATCACCGCGAGCAGCCGCCGTTCTCCACCTACAAGCGGCCAGTATTCT
TTGCTTTTCTGGAGGGTAAGACCTGTGCCGAGTGCAACACCGATTTCGCC
AGCGAGGAGACACATTACACTGGTTGGCTACACTGCGTTAAGTGCAATTA
TCAGACATGTTGCGAGCGAGCGCAATTCCGTCATGGCGTGGAATGTAATG
GAAACTTTGTGGACGCCATGGAAGTGAATATGCCACAGGAGATGCACTGC
ATCTGCGGCTTTGCCACCGGCAACGGCAACAAGATGGCTCAGCACTTGGC
AAATTGTGGACTTAGCACCTGCTACCCAAGTTTGGAGGCTGCCAGTGAGA
ATGCCGTCAAGCGTAATATGCTGGACATGTTGGGCCTGGTTCGACGCGAT
GGAGAAACCTCTGGTGAAGGTGCAGATATTAGCGAGACTGCTGATGATGT
CGCGGATCAGAGCTCCGACATGTTGCCGCCGCAGGAGGACCATCATTTGC
AGCAACACCATCAACAGGTGGGACATCAGCAACAGATGCAGGGACAGCCG
AATGAACCGCAAGCGGAACTTCAACAGGAATACTTGTCGGCGCCAGTTGA
GCATGAGCCCGTGCAGAATATGCCAGTACATCAGAGCATGCCGGTGCAGC
AGACCGGTCCAATACAATTTGGAGAAATGGAGGCGGCCCCAGTTTTGCTG
GATACCCAGCAGCAGGTACAACCCACCCCGGATTATGCTCAAGTTTCGGT
GGTGCAACAGCACCAACAGCAACAGCCCTACGGACTAAGCAACTACGGCC
AAAGCTCTTTAGCCACGGATATCGACATGCCACTGATTGGAGAGCTCTCT
GAGCCAAATGCTCCACCCACGCCCCAGTTCCTGGGCGAGGTGCACACGCC
CATGTTCGATGCAGTCGCTGCCGCCGAGCAGCAGCACTATCACGCCCAGC
ACCATCACCATCCGCAATGATACAAGCCCCACGGAAAGCTCAAATCACGC
GACTATACCCTTCACTGGCAGAACTATTAGTTAAAGTTCATTCATATTCA
TCGCACATTGGCCATATCCCGAATTCCGTATCACCAATACGAAGGCAAAT
AAATTGTATAGCACCTATTTATGAATTGTATATTGGCCCCTTTTAAAATT
AATGAAACATCATAAATGAAATCTCAGTTGCACAAGGGATTTGAATGCTG
GATGTGAGTTGGGATTTTCAAAAGATCCGTTTTGAAAGGCGTAATCAATC
CTCTGCAATGGGATCTTTATCTTTACATCTAAAATATCTTTCAATTCATT
TGAATATTGGAACCTTATTAATTGTAAATGACAAACAATTTAAATTGTAA
ATGACAAACAATTTGTAAGTTTAAAATATACCTTCATATCCTTAAAAAAA
AAAAAAAA

RE01954.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
row-RA 4449 row-RA 48..4442 1..4395 21945 99.9 Plus
row-RB 2379 row-RB 20..1947 1..1928 9610 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:26:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 11093737..11095009 4393..3121 6365 100 Minus
chr2R 21145070 chr2R 11099816..11100823 1008..1 5010 99.8 Minus
chr2R 21145070 chr2R 11098934..11099766 1839..1007 4165 100 Minus
chr2R 21145070 chr2R 11097455..11098278 2752..1929 4120 100 Minus
chr2R 21145070 chr2R 11097022..11097389 3120..2753 1840 100 Minus
chr2R 21145070 chr2R 11098787..11098879 1928..1836 465 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:25:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:26:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15206525..15207799 4395..3121 6375 100 Minus
2R 25286936 2R 15212606..15213613 1008..1 5010 99.8 Minus
2R 25286936 2R 15211724..15212556 1839..1007 4165 100 Minus
2R 25286936 2R 15210245..15211068 2752..1929 4120 100 Minus
2R 25286936 2R 15209812..15210179 3120..2753 1840 100 Minus
2R 25286936 2R 15211577..15211669 1928..1836 465 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:47:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 15207724..15208998 4395..3121 6375 100 Minus
2R 25260384 2R 15213805..15214812 1008..1 5010 99.8 Minus
2R 25260384 2R 15212923..15213755 1839..1007 4165 100 Minus
2R 25260384 2R 15211444..15212267 2752..1929 4120 100 Minus
2R 25260384 2R 15211011..15211378 3120..2753 1840 100 Minus
2R 25260384 2R 15212776..15212868 1928..1836 465 100 Minus
Blast to na_te.dros performed 2019-03-15 19:26:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6832..6990 3478..3638 134 55.6 Plus
X-element 4740 X-element ROXELEMENT 4740bp 1542..1592 3754..3804 120 70.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2343..2441 3482..3577 119 59.6 Plus

RE01954.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:27:22 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 11093737..11095009 3121..4393 100 <- Minus
chr2R 11097022..11097389 2753..3120 100 <- Minus
chr2R 11097455..11098278 1929..2752 100 <- Minus
chr2R 11098787..11098877 1838..1928 100 <- Minus
chr2R 11098936..11099765 1008..1837 100 <- Minus
chr2R 11099817..11100823 1..1007 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:46:14 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
CG8092-RA 1..3846 125..3970 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:33:03 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
row-RA 1..3846 125..3970 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:51:30 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
row-RC 1..3906 125..4030 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:16:51 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
CG8092-RA 1..3846 125..3970 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:18:21 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
row-RC 1..3906 125..4030 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:38:31 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
CG8092-RA 20..4412 1..4393 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:33:03 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
row-RA 20..4412 1..4393 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:51:30 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
row-RA 22..4414 1..4393 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:16:51 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
CG8092-RA 20..4412 1..4393 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:18:21 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
row-RA 22..4414 1..4393 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:27:22 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15211577..15211667 1838..1928 100 <- Minus
2R 15206527..15207799 3121..4393 100 <- Minus
2R 15209812..15210179 2753..3120 100 <- Minus
2R 15210245..15211068 1929..2752 100 <- Minus
2R 15211726..15212555 1008..1837 100 <- Minus
2R 15212607..15213613 1..1007 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:27:22 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15211577..15211667 1838..1928 100 <- Minus
2R 15206527..15207799 3121..4393 100 <- Minus
2R 15209812..15210179 2753..3120 100 <- Minus
2R 15210245..15211068 1929..2752 100 <- Minus
2R 15211726..15212555 1008..1837 100 <- Minus
2R 15212607..15213613 1..1007 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:27:22 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15211577..15211667 1838..1928 100 <- Minus
2R 15206527..15207799 3121..4393 100 <- Minus
2R 15209812..15210179 2753..3120 100 <- Minus
2R 15210245..15211068 1929..2752 100 <- Minus
2R 15211726..15212555 1008..1837 100 <- Minus
2R 15212607..15213613 1..1007 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:51:30 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11094032..11095304 3121..4393 100 <- Minus
arm_2R 11097317..11097684 2753..3120 100 <- Minus
arm_2R 11097750..11098573 1929..2752 100 <- Minus
arm_2R 11099082..11099172 1838..1928 100 <- Minus
arm_2R 11099231..11100060 1008..1837 100 <- Minus
arm_2R 11100112..11101118 1..1007 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:53:56 Download gff for RE01954.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15207726..15208998 3121..4393 100 <- Minus
2R 15211011..15211378 2753..3120 100 <- Minus
2R 15211444..15212267 1929..2752 100 <- Minus
2R 15212776..15212866 1838..1928 100 <- Minus
2R 15212925..15213754 1008..1837 100 <- Minus
2R 15213806..15214812 1..1007 99   Minus

RE01954.pep Sequence

Translation from 124 to 3969

> RE01954.pep
MTRVTRSEISLDMEFWVEELSPAQLAYYEKITNEHNAVKGALKNAVSANE
GKELFNGQVFQAYSFKGKVLQELKEATLPKKPPKPTDSPSTPAAQSGGTG
RGRGRPPRQPSNIAYLESSDEGDDDMPLAKRLALSAGKKAVAVANASSSF
TPKSSKKAASAASGGSSSPVPKSSGKLFKESKPDIESPPKNYRPAEVNSV
GGLVVGSTDESKDSKDGKDGKDNKMQGKTYPSLVVLAKPFLKIKDMAATR
SKLDSKVKLVLMLTPNKFCEWLLQEGLLRAQQHCINHRNNELKLGIYSDV
TKFPYTGGYVWISECCPYRFVSVFNNSIFEGAQHPPTFLLKLIYHWACQT
SIQNVVQWVKVDSVYIKGIYTWLRAICTLAVHQKCKKLGGPGKFVEVGVI
SLGTTSQDGSQRQVKVEVLGVYDYAEKSIRLRAVEPITDGDRNYKKRFQA
ILEPLSRWVHKDSTICIDLTVDKITLFSMGFKNIVQAAATDNTAKHNNSA
VMEYLRRIVPRMFQNTLSLLSRQMIQQFLDELVWRESFGTYALQAFNNII
IHIAEQTRVTTNETITQRLYQVATNPFKDWSILPANYKETPANAAPKRLK
KPINDADYVVSNKIPKKEKDRDIASSGVKRGRPPNALGTPPPQLPIKKGP
GRPPGSTNQTKGDRATTSSSKSLSKSLIAKGLGKKPKEKDEKIPMVIKKE
EDDLRGLEELYYGISDGTDEYHEIFPYSTPRTVHNELAKTVECPICLNGD
SFDSNEKLQTHLVSHISPEGKQHQFQCLFCLEKHPTESVLAKHNQIMHPT
ETKTEGSPSYYCLICQQRHNSLHLLTAHLQKVHSTLELPYWCHSCGYRSS
SHRDLVRHFYDDHKHQNFLQCPYCLDIFYFSKLGVVNQLRIEHYFMHLDE
HINKRDPSLRCQKCSLSFLEKGDLKQHAVQHHVSMTKTNRPVRLLLNNSM
LIPPPKIRTHHREQPPFSTYKRPVFFAFLEGKTCAECNTDFASEETHYTG
WLHCVKCNYQTCCERAQFRHGVECNGNFVDAMEVNMPQEMHCICGFATGN
GNKMAQHLANCGLSTCYPSLEAASENAVKRNMLDMLGLVRRDGETSGEGA
DISETADDVADQSSDMLPPQEDHHLQQHHQQVGHQQQMQGQPNEPQAELQ
QEYLSAPVEHEPVQNMPVHQSMPVQQTGPIQFGEMEAAPVLLDTQQQVQP
TPDYAQVSVVQQHQQQQPYGLSNYGQSSLATDIDMPLIGELSEPNAPPTP
QFLGEVHTPMFDAVAAAEQQHYHAQHHHHPQ*

RE01954.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:13:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12625-PA 1290 GF12625-PA 1..1276 1..1268 5637 85.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22370-PA 1279 GG22370-PA 1..1279 1..1281 6752 96.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:13:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20795-PA 1312 GH20795-PA 1..1293 1..1268 5172 77.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:51
Subject Length Description Subject Range Query Range Score Percent Strand
row-PC 1301 CG8092-PC 1..1281 1..1281 6830 100 Plus
row-PA 1281 CG8092-PA 1..1281 1..1281 6830 100 Plus
row-PB 602 CG8092-PB 1..601 1..601 3116 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:13:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20880-PA 1327 GI20880-PA 1..1300 1..1268 5012 76.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11474-PA 1271 GL11474-PA 1..1258 1..1268 5251 82 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:13:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20818-PA 1271 GA20818-PA 1..1258 1..1268 5226 81.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:13:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20154-PA 770 GM20154-PA 1..770 1..770 4035 97.3 Plus
Dsec\GM20155-PA 485 GM20155-PA 1..485 797..1281 2643 99 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:13:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25633-PA 1260 GD25633-PA 1..1260 1..1281 6725 96.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:13:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20615-PA 1300 GJ20615-PA 1..1281 1..1268 5228 78.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19444-PA 1322 GK19444-PA 1..1307 1..1268 5168 78.3 Plus
Dwil\GK13681-PA 127 GK13681-PA 70..126 545..601 261 87.7 Plus
Dwil\GK13681-PA 127 GK13681-PA 5..43 419..457 169 82.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:13:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12258-PA 1281 GE12258-PA 1..1281 1..1281 6769 96.8 Plus

RE01954.hyp Sequence

Translation from 124 to 3969

> RE01954.hyp
MTRVTRSEISLDMEFWVEELSPAQLAYYEKITNEHNAVKGALKNAVSANE
GKELFNGQVFQAYSFKGKVLQELKEATLPKKPPKPTDSPSTPAAQSGGTG
RGRGRPPRQPSNIAYLESSDEGDDDMPLAKRLALSAGKKAVAVANASSSF
TPKSSKKAASAASGGSSSPVPKSSGKLFKESKPDIESPPKNYRPAEVNSV
GGLVVGSTDESKDSKDGKDGKDNKMQGKTYPSLVVLAKPFLKIKDMAATR
SKLDSKVKLVLMLTPNKFCEWLLQEGLLRAQQHCINHRNNELKLGIYSDV
TKFPYTGGYVWISECCPYRFVSVFNNSIFEGAQHPPTFLLKLIYHWACQT
SIQNVVQWVKVDSVYIKGIYTWLRAICTLAVHQKCKKLGGPGKFVEVGVI
SLGTTSQDGSQRQVKVEVLGVYDYAEKSIRLRAVEPITDGDRNYKKRFQA
ILEPLSRWVHKDSTICIDLTVDKITLFSMGFKNIVQAAATDNTAKHNNSA
VMEYLRRIVPRMFQNTLSLLSRQMIQQFLDELVWRESFGTYALQAFNNII
IHIAEQTRVTTNETITQRLYQVATNPFKDWSILPANYKETPANAAPKRLK
KPINDADYVVSNKIPKKEKDRDIASSGVKRGRPPNALGTPPPQLPIKKGP
GRPPGSTNQTKGDRATTSSSKSLSKSLIAKGLGKKPKEKDEKIPMVIKKE
EDDLRGLEELYYGISDGTDEYHEIFPYSTPRTVHNELAKTVECPICLNGD
SFDSNEKLQTHLVSHISPEGKQHQFQCLFCLEKHPTESVLAKHNQIMHPT
ETKTEGSPSYYCLICQQRHNSLHLLTAHLQKVHSTLELPYWCHSCGYRSS
SHRDLVRHFYDDHKHQNFLQCPYCLDIFYFSKLGVVNQLRIEHYFMHLDE
HINKRDPSLRCQKCSLSFLEKGDLKQHAVQHHVSMTKTNRPVRLLLNNSM
LIPPPKIRTHHREQPPFSTYKRPVFFAFLEGKTCAECNTDFASEETHYTG
WLHCVKCNYQTCCERAQFRHGVECNGNFVDAMEVNMPQEMHCICGFATGN
GNKMAQHLANCGLSTCYPSLEAASENAVKRNMLDMLGLVRRDGETSGEGA
DISETADDVADQSSDMLPPQEDHHLQQHHQQVGHQQQMQGQPNEPQAELQ
QEYLSAPVEHEPVQNMPVHQSMPVQQTGPIQFGEMEAAPVLLDTQQQVQP
TPDYAQVSVVQQHQQQQPYGLSNYGQSSLATDIDMPLIGELSEPNAPPTP
QFLGEVHTPMFDAVAAAEQQHYHAQHHHHPQ*

RE01954.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:22:35
Subject Length Description Subject Range Query Range Score Percent Strand
row-PC 1301 CG8092-PC 1..1281 1..1281 6830 100 Plus
row-PA 1281 CG8092-PA 1..1281 1..1281 6830 100 Plus
row-PB 602 CG8092-PB 1..601 1..601 3116 100 Plus