BDGP Sequence Production Resources |
Search the DGRC for RE02049
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 20 |
Well: | 49 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG32694-RA |
Protein status: | RE02049.pep: gold |
Preliminary Size: | 633 |
Sequenced Size: | 2460 |
Gene | Date | Evidence |
---|---|---|
CG12634 | 2002-01-01 | Sim4 clustering to Release 2 |
CG32694 | 2002-04-22 | Blastp of sequenced clone |
CG32694 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32694 | 2008-04-29 | Release 5.5 accounting |
CG32694 | 2008-08-15 | Release 5.9 accounting |
CG32694 | 2008-12-18 | 5.12 accounting |
2460 bp (2460 high quality bases) assembled on 2002-04-22
GenBank Submission: AY113378
> RE02049.complete AGTATCAATTGCAGGCCCAACAGCCCAGACCACAAAGAGAAGCAGTCGCA GTCAGTCGCACCACCGATCCACGATCCACTGATCCACCGATCCACGCAAT TGTTGCTGTTTCTTTTTTAGACAAAAAAGAAATATATATAATTTTTTTTT GGGCTGTTTACATTTTGGCCAAAACGCCACACCCACACACTCCCACGTCC CGCTCACACACACACAAACACACACGCGCACGCGACAAAAACAGCATGAG GCAGCCAAGTAGACAGCACATCCTGGCGCTCCTGATCCTCGGCAGCGCCG CCTGCCTCATCAGCGCCGTACCGCTACCGCAGCCCGCCAACGGTAATTCC GAGCTGGACGTCCTCCAAATCCCGCTTGCCAATGGCAAGGAAATCGATGT CTTGACATTGGGCGCCAAAGACCAAGAATCATTGATAGCCGATCGCAACA AACGAACGATTGGACTGCTGCGCGAACTTTTCCCCGACATCACCAAGAAT GGAGCCACTGATACCCAGATCGATTTGTCGGCCATCAACAAGCAATTGGA GGAGACAATCCGTGTGGCCCGCCAGGTGAAGGAGGCGGAAGCAGCCGCCG CCGCAGTTGCCGCCCAGTCCCTGTCCCCATCCTCGTCCTCCGCCTCCTCG CCGGTCGCCCAGGCTCCCATTCCCCTCAAATCCAACGAGCCCATCCAGCT GAGCTTCAACAACGAACTGCCCAGTGTCTCGCCGTCCTCCGGTGTGAACG AAAAGGCCCTGAGCACCAATGATCTCCAGCTCTCCGAGTCCAAGTCGCCG GCGATCGATGAACTCACCCTAGACTCTGCGGAGGAGACCGCCGATCTGGA CGATCGCAACAAGAGTAATCTGTTCAAAAGGTTCCTCAGCTTTGGCGGTG CGGGTCTCGCCGGCGGCTCAAGCGGCGGTGCAGGAGGTTCGCCCAGTGGC AATGCTCTGGGAGCCGGCGGCTCCGGCAACTTCCTGCTGGATGTGGTGAG GCTCTTTTCGGGCAGTGTTCAGACCCAGCAGGGCGATGAGGCGGCCAACT CGGTGGGCGGCAGTGCAGGCAGCAGCAGTAGCAGCGGCAGTTTGGGCGGC GATGGTGACGCCGATGGCGATAGCACTCGCAACGCCGATGGCTACACCGA GGGCATTCCCGGCCCAGTCACGCGCCTCGTGGTGCTGGCCAATCGCGGTC TGGCCAATCTCGTCCAGGATTTGATTCTGCGCGTTGCGGCCACCAGCGAG AAGTTCGTGAACTTCAAGGCCAAGCTGATAACGGCGCTGATCTAAGGTCA AGGGTCAGCACCGGCCACGCCCTCGCCCGAATTAGTCAAGTCACCAACCT GTACAGAGTCAAATGCAGCAGATCATTCTCTCTAACTCGCTAGCCCCAAA CGCCCCGAAAGTCTGTCTCTATCTCCCTCTGTCTCACCCCAGAAATAACC CCCTTTCCAATGCCCCACACACCCACTCACAACAACCCCACACACACACA CACACACACAAACACGGCCACTCATTCACACGGAGAGAATTTTGTTCGAT CAAAGAAATTTCCCGGCAATGTCAACATCTTTTTTTTAAATTCATAGCAA ATTTTTTTATAACATAAACGAAATTAGTTAAAACAAACTAAACACAAAAA AAAAATTATAAAACCATAAGCAAAATTGGCAGAAAAAAAAACCCGAATCA AAGAATTTTATTTATATGTATCAATAAAAGAAACAAAATCGAATCGAAAG TATGGAAACAACATTCATATGAATATGTTTAGAAGAAGAAACGCCTGATA CAATTATTCCTGCCCTAGTACTATATCTCTATTTTCCCTGACCCGTCTAT CCATATCTTTAAAATTTTCAACGGCTTTTGTAAATATTTTGCTATTTGCA AATTTTCCCCCACCACTTTTCCTAAACCCAATTTCCCTAATTTGTAATTG ACCTCTTCTCTCCTTTTTGTGTATATTTTGTGTTCTATTAAAAAAAATCA TGACTGTGGTGTTTTATTTACTATTATTTTTAATTATTTTAAACGAAAAC GAAACGAAGAAGATGAATGTGAAGATAATGATGATGATGATGATGATGAA GAAGAAAGCTAAGTGGATGCAGAAGACACGTCAAGTTTCTATTAGATGAA ATGTAGCCGAGCTTAATGTTTTTTTTTATTTGCTGTTGTTGGTCAAAGAG CCCCAAAAACACCCATACACAAACACGCACATTCACTGAAGCATACTCAA TATATAAAACCGATTCGATATGCCTATTATATATATAGAACCGTTCTTGT TCGACTTCCCTGTGTCCCCTGGATTTGTTTGTAACTCCCCATAATCCTAA GCGAATTGTGTTTTTCTAACTATGATTTTTTTCTAGCTAGCTAAGTGAAA CTTTCGAAAAATGTGTATAAAATAAAATAAAATGATTATAAACAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9897313..9898534 | 1229..2442 | 5815 | 98.9 | Plus |
chrX | 22417052 | chrX | 9896030..9896400 | 495..865 | 1855 | 100 | Plus |
chrX | 22417052 | chrX | 9897015..9897243 | 1001..1229 | 1115 | 99.1 | Plus |
chrX | 22417052 | chrX | 9884617..9884829 | 178..390 | 1065 | 100 | Plus |
chrX | 22417052 | chrX | 9881337..9881510 | 4..177 | 870 | 100 | Plus |
chrX | 22417052 | chrX | 9896789..9896930 | 860..1001 | 695 | 99.3 | Plus |
chrX | 22417052 | chrX | 9890832..9890941 | 388..497 | 550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 10005672..10006885 | 1229..2442 | 6055 | 99.9 | Plus |
X | 23542271 | X | 10004389..10004759 | 495..865 | 1855 | 100 | Plus |
X | 23542271 | X | 10005374..10005602 | 1001..1229 | 1130 | 99.6 | Plus |
X | 23542271 | X | 9992978..9993190 | 178..390 | 1065 | 100 | Plus |
X | 23542271 | X | 9989699..9989872 | 4..177 | 870 | 100 | Plus |
X | 23542271 | X | 10005148..10005289 | 860..1001 | 695 | 99.3 | Plus |
X | 23542271 | X | 9999191..9999300 | 388..497 | 550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 10013770..10014983 | 1229..2442 | 6055 | 99.9 | Plus |
X | 23527363 | X | 10012487..10012857 | 495..865 | 1855 | 100 | Plus |
X | 23527363 | X | 10013472..10013700 | 1001..1229 | 1130 | 99.5 | Plus |
X | 23527363 | X | 10001076..10001288 | 178..390 | 1065 | 100 | Plus |
X | 23527363 | X | 9997797..9997970 | 4..177 | 870 | 100 | Plus |
X | 23527363 | X | 10013246..10013387 | 860..1001 | 695 | 99.2 | Plus |
X | 23527363 | X | 10007289..10007398 | 388..497 | 550 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9884673..9884828 | 234..389 | 100 | -> | Plus |
chrX | 9890834..9890941 | 390..497 | 100 | -> | Plus |
chrX | 9896033..9896400 | 498..865 | 100 | -> | Plus |
chrX | 9896795..9896930 | 866..1001 | 100 | -> | Plus |
chrX | 9897016..9897069 | 1002..1055 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RC | 1..1050 | 246..1295 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RC | 1..1050 | 246..1295 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RA | 1..1050 | 246..1295 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RC | 1..1050 | 246..1295 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RA | 1..1050 | 246..1295 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RA | 1..2443 | 1..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RA | 1..2443 | 1..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RA | 1..2440 | 1..2439 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RA | 1..2443 | 1..2442 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32694-RA | 1..2440 | 1..2439 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10005154..10005289 | 866..1001 | 100 | -> | Plus |
X | 10005375..10005602 | 1002..1229 | 99 | -> | Plus |
X | 9999193..9999300 | 390..497 | 100 | -> | Plus |
X | 10004392..10004759 | 498..865 | 100 | -> | Plus |
X | 9989695..9989872 | 1..177 | 99 | -> | Plus |
X | 9992978..9993189 | 178..389 | 100 | -> | Plus |
X | 10005673..10006885 | 1230..2443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10005154..10005289 | 866..1001 | 100 | -> | Plus |
X | 10005375..10005602 | 1002..1229 | 99 | -> | Plus |
X | 9999193..9999300 | 390..497 | 100 | -> | Plus |
X | 10004392..10004759 | 498..865 | 100 | -> | Plus |
X | 9989695..9989872 | 1..177 | 99 | -> | Plus |
X | 9992978..9993189 | 178..389 | 100 | -> | Plus |
X | 10005673..10006885 | 1230..2443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10005154..10005289 | 866..1001 | 100 | -> | Plus |
X | 10005375..10005602 | 1002..1229 | 99 | -> | Plus |
X | 9999193..9999300 | 390..497 | 100 | -> | Plus |
X | 10004392..10004759 | 498..865 | 100 | -> | Plus |
X | 9989695..9989872 | 1..177 | 99 | -> | Plus |
X | 9992978..9993189 | 178..389 | 100 | -> | Plus |
X | 10005673..10006885 | 1230..2443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9899187..9899322 | 866..1001 | 100 | -> | Plus |
arm_X | 9883728..9883905 | 1..177 | 99 | -> | Plus |
arm_X | 9887011..9887222 | 178..389 | 100 | -> | Plus |
arm_X | 9893226..9893333 | 390..497 | 100 | -> | Plus |
arm_X | 9899408..9899635 | 1002..1229 | 99 | -> | Plus |
arm_X | 9898425..9898792 | 498..865 | 100 | -> | Plus |
arm_X | 9899706..9900918 | 1230..2443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 10001076..10001287 | 178..389 | 100 | -> | Plus |
X | 10007291..10007398 | 390..497 | 100 | -> | Plus |
X | 10012490..10012857 | 498..865 | 100 | -> | Plus |
X | 10013252..10013387 | 866..1001 | 100 | -> | Plus |
X | 10013473..10013700 | 1002..1229 | 99 | -> | Plus |
X | 10013771..10014983 | 1230..2443 | 99 | Plus | |
X | 9997793..9997970 | 1..177 | 99 | -> | Plus |
Translation from 0 to 1294
> RE02049.hyp SNQLQAQQPRPQREAVAVSRTTDPRSTDPPIHAIVAVSFLDKKEIYIIFF WAVYILAKTPHPHTPTSRSHTHKHTRARDKNSMRQPSRQHILALLILGSA ACLISAVPLPQPANGNSELDVLQIPLANGKEIDVLTLGAKDQESLIADRN KRTIGLLRELFPDITKNGATDTQIDLSAINKQLEETIRVARQVKEAEAAA AAVAAQSLSPSSSSASSPVAQAPIPLKSNEPIQLSFNNELPSVSPSSGVN EKALSTNDLQLSESKSPAIDELTLDSAEETADLDDRNKSNLFKRFLSFGG AGLAGGSSGGAGGSPSGNALGAGGSGNFLLDVVRLFSGSVQTQQGDEAAN SVGGSAGSSSSSGSLGGDGDADGDSTRNADGYTEGIPGPVTRLVVLANRG LANLVQDLILRVAATSEKFVNFKAKLITALI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32694-PC | 349 | CG32694-PC | 1..349 | 83..431 | 1707 | 100 | Plus |
CG32694-PA | 349 | CG32694-PA | 1..349 | 83..431 | 1707 | 100 | Plus |
CG32694-PF | 344 | CG32694-PF | 1..344 | 83..431 | 1666 | 98.6 | Plus |
CG32694-PG | 195 | CG32694-PG | 1..185 | 83..248 | 435 | 55.7 | Plus |
CG32694-PE | 187 | CG32694-PE | 1..142 | 83..217 | 429 | 70.4 | Plus |
Translation from 245 to 1294
> RE02049.pep MRQPSRQHILALLILGSAACLISAVPLPQPANGNSELDVLQIPLANGKEI DVLTLGAKDQESLIADRNKRTIGLLRELFPDITKNGATDTQIDLSAINKQ LEETIRVARQVKEAEAAAAAVAAQSLSPSSSSASSPVAQAPIPLKSNEPI QLSFNNELPSVSPSSGVNEKALSTNDLQLSESKSPAIDELTLDSAEETAD LDDRNKSNLFKRFLSFGGAGLAGGSSGGAGGSPSGNALGAGGSGNFLLDV VRLFSGSVQTQQGDEAANSVGGSAGSSSSSGSLGGDGDADGDSTRNADGY TEGIPGPVTRLVVLANRGLANLVQDLILRVAATSEKFVNFKAKLITALI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19160-PA | 289 | GF19160-PA | 187..289 | 245..349 | 479 | 92.4 | Plus |
Dana\GF19160-PA | 289 | GF19160-PA | 1..91 | 1..93 | 300 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18334-PA | 450 | GG18334-PA | 184..450 | 83..349 | 1294 | 97.8 | Plus |
Dere\GG18334-PA | 450 | GG18334-PA | 1..99 | 1..106 | 431 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11811-PA | 445 | GH11811-PA | 188..445 | 85..349 | 833 | 80.7 | Plus |
Dgri\GH11811-PA | 445 | GH11811-PA | 1..98 | 1..106 | 350 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32694-PC | 349 | CG32694-PC | 1..349 | 1..349 | 1707 | 100 | Plus |
CG32694-PA | 349 | CG32694-PA | 1..349 | 1..349 | 1707 | 100 | Plus |
CG32694-PF | 344 | CG32694-PF | 1..344 | 1..349 | 1666 | 98.6 | Plus |
CG32694-PB | 364 | CG32694-PB | 1..226 | 1..207 | 438 | 48.1 | Plus |
CG32694-PG | 195 | CG32694-PG | 1..185 | 1..166 | 435 | 55.7 | Plus |
CG32694-PE | 187 | CG32694-PE | 1..142 | 1..135 | 429 | 70.4 | Plus |
CG32694-PH | 167 | CG32694-PH | 1..84 | 1..84 | 415 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15997-PA | 524 | GI15997-PA | 256..524 | 85..349 | 804 | 76.3 | Plus |
Dmoj\GI15997-PA | 524 | GI15997-PA | 1..99 | 1..108 | 357 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22929-PA | 260 | GL22929-PA | 1..260 | 85..349 | 685 | 71.1 | Plus |
Dper\GL16386-PA | 189 | GL16386-PA | 1..82 | 1..84 | 360 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17079-PA | 457 | GA17079-PA | 191..457 | 85..349 | 869 | 79.5 | Plus |
Dpse\GA17079-PA | 457 | GA17079-PA | 1..97 | 1..106 | 371 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18828-PA | 255 | GM18828-PA | 1..245 | 1..268 | 579 | 59.7 | Plus |
Dsec\GM18829-PA | 66 | GM18829-PA | 1..66 | 284..349 | 332 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24704-PA | 167 | GD24704-PA | 1..84 | 1..84 | 433 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18723-PA | 553 | GJ18723-PA | 293..553 | 85..349 | 683 | 73.8 | Plus |
Dvir\GJ18723-PA | 553 | GJ18723-PA | 1..99 | 1..108 | 365 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25367-PA | 672 | GK25367-PA | 413..672 | 81..349 | 886 | 83.5 | Plus |
Dwil\GK25367-PA | 672 | GK25367-PA | 1..101 | 1..108 | 361 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17821-PA | 152 | GE17821-PA | 10..152 | 207..349 | 693 | 98.6 | Plus |