BDGP Sequence Production Resources |
Search the DGRC for RE02355
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 23 |
Well: | 55 |
Vector: | pFlc-1 |
Associated Gene/Transcript | MrgBP-RA |
Protein status: | RE02355.pep: gold |
Preliminary Size: | 606 |
Sequenced Size: | 766 |
Gene | Date | Evidence |
---|---|---|
CG13746 | 2002-01-01 | Sim4 clustering to Release 2 |
CG13746 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13746 | 2003-08-02 | Blastp of sequenced clone |
MrgBP | 2008-04-29 | Release 5.5 accounting |
MrgBP | 2008-08-15 | Release 5.9 accounting |
MrgBP | 2008-12-18 | 5.12 accounting |
766 bp (766 high quality bases) assembled on 2003-08-02
GenBank Submission: AY070912
> RE02355.complete AATATTCGCGCAGAAAAACATACAATACGTATCAGTTTTTAGTTCCATGC GCTCTGCAAAATGATGGCCAAGGACAAGGGTCTGGCTGTGGCCGGAACGG CGGCCCCCTTACCGGCCGCCCTCGACCACGAGTGGTCCGCCGAGGAAGAG CTGCAGCTGTTCCATGCAATGGAAGGCCTGCGCCCGGTGGGCATCAACAA GCACTTCTACATGTCCTGCATTGTCCAGCGTCTGTCCAAGTCGCTGAACC GTGAAATGCCCAGCGAGCTGATCTGGCGCCACCTGGGCACCATGTACAAG CTGAAGGAACTGGACGATCTGGAGTCGCTGCCCTTTCCCAACGAGGAGCG CGAGTTCAGCCTGCCGGAGCAGGATTACGGAACGCTACAGACCAAAAAGA CGGTGGAAGTGCATGCGAACGAGGAGGCTGCAGAGGCACAGTCGGCCCCT CCAACAGCAGAGACCAATGGCAAAGCTCCACCTGCAACCAAAACGCCGGT ACCGACGAATTCCACCAAGGACGGCGACAAAAAGCCCGTCGCCAAGCCCC AGGAGCAGCTGCCCAAGCGTCCGGCCAAGCGCACACGCGGCTCCATGTCC AACGAGTCCATCAGCCCCTCCACTACGCCGCCGCCGGTGCAGAGCAACAA GCGCCGTCGCATATAGGTGACCCCCGCCCGAAACTGACGATTGTTGATCC GTTTTAGCTCATTAGTTTTACTGTACTCTAATAAAAGGATTTATTGTTCG AAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4788119..4788393 | 476..750 | 99 | <- | Minus |
chr2R | 4788446..4788920 | 1..475 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 1..606 | 61..666 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 1..606 | 61..666 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 1..606 | 61..666 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 1..606 | 61..666 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 1..606 | 61..666 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 6..755 | 1..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 6..755 | 1..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 9..758 | 1..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 6..755 | 1..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MrgBP-RA | 9..758 | 1..750 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8900566..8900840 | 476..750 | 99 | <- | Minus |
2R | 8900893..8901367 | 1..475 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8900566..8900840 | 476..750 | 99 | <- | Minus |
2R | 8900893..8901367 | 1..475 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8900566..8900840 | 476..750 | 99 | <- | Minus |
2R | 8900893..8901367 | 1..475 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4788071..4788345 | 476..750 | 99 | <- | Minus |
arm_2R | 4788398..4788872 | 1..475 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8901765..8902039 | 476..750 | 99 | <- | Minus |
2R | 8902092..8902566 | 1..475 | 99 | Minus |
Translation from 60 to 665
> RE02355.pep MMAKDKGLAVAGTAAPLPAALDHEWSAEEELQLFHAMEGLRPVGINKHFY MSCIVQRLSKSLNREMPSELIWRHLGTMYKLKELDDLESLPFPNEEREFS LPEQDYGTLQTKKTVEVHANEEAAEAQSAPPTAETNGKAPPATKTPVPTN STKDGDKKPVAKPQEQLPKRPAKRTRGSMSNESISPSTTPPPVQSNKRRR I*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12563-PA | 204 | GF12563-PA | 1..204 | 1..201 | 804 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10614-PA | 201 | GG10614-PA | 1..201 | 1..201 | 1002 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22690-PA | 183 | GH22690-PA | 6..183 | 24..201 | 631 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MrgBP-PA | 201 | CG13746-PA | 1..201 | 1..201 | 1048 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20617-PA | 190 | GI20617-PA | 13..190 | 24..201 | 647 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10410-PA | 200 | GL10410-PA | 1..200 | 1..201 | 784 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12503-PA | 200 | GA12503-PA | 1..200 | 1..201 | 783 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20658-PA | 201 | GM20658-PA | 1..201 | 1..201 | 1022 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10131-PA | 201 | GD10131-PA | 1..201 | 1..201 | 1039 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21057-PA | 181 | GJ21057-PA | 5..181 | 24..201 | 629 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20940-PA | 200 | GK20940-PA | 14..200 | 23..201 | 603 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22753-PA | 201 | GE22753-PA | 1..201 | 1..201 | 916 | 91 | Plus |
Translation from 60 to 665
> RE02355.hyp MMAKDKGLAVAGTAAPLPAALDHEWSAEEELQLFHAMEGLRPVGINKHFY MSCIVQRLSKSLNREMPSELIWRHLGTMYKLKELDDLESLPFPNEEREFS LPEQDYGTLQTKKTVEVHANEEAAEAQSAPPTAETNGKAPPATKTPVPTN STKDGDKKPVAKPQEQLPKRPAKRTRGSMSNESISPSTTPPPVQSNKRRR I*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MrgBP-PA | 201 | CG13746-PA | 1..201 | 1..201 | 1048 | 100 | Plus |