Clone RE02540 Report

Search the DGRC for RE02540

Clone and Library Details

Library:RE
Tissue Source:Drosophila melanogaster embryo
Created by:Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:2000-10-23
Comments:Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:25
Well:40
Vector:pFlc-1
Associated Gene/TranscriptCG42540-RB
Protein status:RE02540.pep: gold
Sequenced Size:3233

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32245 2005-01-26 Blastp of sequenced clone
CG32245 2008-04-29 Release 5.5 accounting
CG32245 2008-08-15 Release 5.9 accounting
CG32245 2008-12-18 5.12 accounting

Clone Sequence Records

RE02540.complete Sequence

3233 bp (3233 high quality bases) assembled on 2005-01-26

GenBank Submission: BT021331

> RE02540.complete
AGTGTTCCTCGACTGGCCAGCGAGTGCGGTACGGTCATAGTTCAACATTG
GGATTAAATATTGACTTGCGAACGGACAGGACATGGCGGCAATGAGTGCG
GATATTGTGCCCATGGAACAAGTGAGCTCGATGGTCTCCAATGGCGGTGG
CAGCGTGGCCATGCAGCGCGATGATGAGTACAGGAATCGGATCATGAAAA
TACGTAGACTTGATACACAAGCAAAACATTCACATGGATTTCTCTATTCG
GACGAGGAAATCAGCGATAAGGCATCAACATGCGGAAAATTGCTAATATT
TCTTTCCGTGGCTCTTGTGATAATGACGCTACCCTTCAGTCTCTTTGTTT
GCTTTAAGGTGGTGCAGGAGTACGAGCGCGCGGTTATCTTCCGTTTGGGT
CGTCTTATGCAGGGCGGTGCCAAGGGCCCAGGTATCTTCTTCATCCTGCC
CTGCATTGACTCCTATGCCCGTGTGGACTTGCGTACTCGCACATACGATG
TGCCACCGCAGGAGGTTCTCACAAAGGATAGCGTTACGGTTTCGGTGGAT
GCAGTGGTTTACTATCGGGTATCAAATGCGACCGTCTCTATCGCGAACGT
GGAGAATGCTCACCATTCGACCAGGCTACTGGCACAGACTACTCTACGAA
ACACAATGGGAACTCGGCATTTGCATGAGATACTCAGCGAGCGTATGACG
ATTTCCGGCACAATGCAGGTTCAACTCGACGAAGCCACCGATGCCTGGGG
CATCAAAGTTGAACGTGTGGAAATCAAGGACGTGCGTCTGCCGGTGCAAC
TGCAACGTGCCATGGCCGCGGAGGCAGAAGCCGCCCGGGAAGCCCGCGCC
AAAGTCATCGCCGCCGAAGGAGAACAGAAGGCGTCGAGGGCTCTTCGCGA
GGCGTCCGAGGTGATTGGCGATTCGCCGGCTGCCCTCCAACTGCGCTACC
TTCAGACACTCAACACCATATCTGCGGAGAAGAACTCGACGATTGTGTTC
CCGCTGCCCATCGATTTAATAACATATTTCCTGAAGACCAACGAGGCCAC
AACGCAGCAAAATGCCCGAGCAGCTGCGGCAGCAATTGGCAACACACCGC
CGCCATTGCAACTGGCGCCGCAGCAGCAGATGGGGCAGCAGCAACAGCCG
CAGTACCAACAGCCGCAGCAGCAGCAGCAGCAGTACCAACCGCAGCAGCA
ACAACAGCAGCAGCAGCAACAGCCGCAGCAGCAAGATCAACTCTATCAAC
AGGGGCAGCAGATCTCATCAGCCATGTAAATCAGCTTAAGATCACAAAAG
TTTCGGCTTCGTCGACTCTAAAATGTCCTGCACAATGTTTGAAAAATATC
CTGTTAGCATAAAAATACATCAGGAATTTGTATCATATATGCATTTCCTT
TAAAGAAATGCATATCCAAATATCGATAGGAAAAAGTGTAACTGAACAGG
CTTTTTTCTCCAGTCGAAAATATTGCTTCATTTTCAAAGGCTGGGCAACT
CTGACGACCAACTTAAAAATGTGTATCTCAAATCCCCATATCCCTTTCCC
CTGAGATGCACATTTTGAGTTACTATCCTTTAGGAAATGCTGGAAAGCTG
GCTATGTAATTCTTGTTAGGGAATGTAATGTAATGCATTTTTCTGGGCTT
TTTAAGCAGCAGCTCTAAATATAATTGTGCAGAGCGTTTCAACAGAAAAA
CCCAAGAACAAAAAACAACCAACGGAAACAACGATTCAAAAGAATCAAAA
ATCTTAGTTCATAACACCGATAAGTGCGATTCGAATGCGTTAGTCGACTG
CAGATCCTTCAAGAAAGAAACGAGGGATCTGAGGTCAAATAGATACAAAG
ATACAAACCTAGACTAGTTTCATACGAGGCGAAAATAGAGTTTAATATTT
GTAGCTTTACGACCAGAGGATGCAATTCTAAATATTAAATGTAGGAACTA
GCGGTGCAACTCAAATTTAGCACACACAACACAAAAATCAAAGTAAAATA
CTTACTATTAAAATCATACCATATGATGTGCGGTCGTTCAGGTGAAAATT
CTAAAACCAACCAGTTTTGAAAGTCTTGAATTGTGAAATTTGAAATAGTC
AAAAATGGTTGGTTTGGTTTTGTCTTTTCACGAACTGAGCGAGCCACAGA
TTATTGTTTGTTTTTCTCTCAATATTCCACGAAGGTCCGTTTCCTTGCAT
TCTAGTTAAGTGTTAGACCATTTTGTTACTTTAATTACGTATTTTATTAA
AAATTTCTTTTTAATAATAAATTAATTAACTGATCTAAGAAAACGGGCCG
TCGTTGAACCAAAATATTCAATGAACTGTTGACAAAGGCGTTTTGTAATT
GTTTATCCGTAAGATGGTTACCCTGTTAATTATGGATGAATCTGATTACT
TAAAATATTGCTGTATACTTAGCTATGCAAATTTAACTTTAAGTCGTGAT
CAGGTTAGTTCGTATAAAATAGAGTTACTGTTGTTCAAAACCAATTAAGA
CTTTATAGGACTTTAATAACTCTCATTATGAACAGTTGTACTCATATGGT
ACACTCCAACTAATACAACTGTTAATCTGTTTCCACTGGAGCTAATCCAG
GCATCTAGAGGATTTTTTTTGATCATAGTGGGTTTAGATATCTATTAAAA
ATATCGATCAGTTTTAAAAGTTATCTGAACCCACGCTAACAGATGAAATC
AACTAGTCAGCAACGTTCGTAGGTCCAAAATACGAATGCCAAACAATAAA
TAAGAGTAATACGAATTTATTGTACATACAATAAACAAATAGAGCATTTA
AGCCGTACAGAACTGTTTTACCAATTGACACCTTAATTAATATTGCATAT
TCGTATCGGGTATACACCACACACAAACACATACACAGGATCGTAGAAGG
TAGCCTCTCTCGAAGTAGAATCCGTCTACTTGAATATGTCTGAAGTACGA
AGAAGTCGACGAAAGAAATGCATCTTATGCTAGAATGTATTTGCAACACG
AAAAAGTTTACTTTTTAGCGCACTTCATGGAGTACGAAACGAGTTATTGA
TATAATAATATATATACATATGCAAGCATAACGAACTACATATTATGTAC
AATTTTGCCTTTGAAAATTTTTAAACAGAAACGATTTCATTATCCACATA
CAATTAGATTTATGTGTAAAGGAACAATAAAATTTCTTCAACTTTTTTGG
TATCCAAAAGAGCAAAAGCAAAAAAAAAAAAAA

RE02540.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG42540-RB 3285 CG42540-RB 67..3283 1..3217 16055 99.9 Plus
CG42540-RF 3609 CG42540-RF 602..3607 212..3217 15000 99.9 Plus
CG42540.d 3237 CG42540.d 267..3235 249..3217 14815 99.9 Plus
CG42540-RF 3609 CG42540-RF 67..278 1..212 1060 100 Plus
CG42540.d 3237 CG42540.d 67..266 1..200 1000 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:42:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4589336..4591603 950..3217 11110 99.5 Plus
chr3L 24539361 chr3L 4585888..4586095 513..720 1040 100 Plus
chr3L 24539361 chr3L 4589097..4589277 775..955 905 100 Plus
chr3L 24539361 chr3L 4578073..4578184 249..360 560 100 Plus
chr3L 24539361 chr3L 4563098..4563198 100..200 505 100 Plus
chr3L 24539361 chr3L 4555412..4555512 1..101 505 100 Plus
chr3L 24539361 chr3L 4579387..4579474 429..516 440 100 Plus
chr3L 24539361 chr3L 4578758..4578834 357..433 385 100 Plus
chr3L 24539361 chr3L 4587376..4587434 716..774 295 100 Plus
chrX 22417052 chrX 19075213..19075311 812..910 210 80.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:25:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:42:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4590026..4592300 950..3224 11330 99.9 Plus
3L 28110227 3L 4586578..4586785 513..720 1040 100 Plus
3L 28110227 3L 4589787..4589967 775..955 905 100 Plus
3L 28110227 3L 4578760..4578871 249..360 560 100 Plus
3L 28110227 3L 4556087..4556187 1..101 505 100 Plus
3L 28110227 3L 4563796..4563896 100..200 505 100 Plus
3L 28110227 3L 4580074..4580161 429..516 440 100 Plus
3L 28110227 3L 4579445..4579521 357..433 385 100 Plus
3L 28110227 3L 4588066..4588124 716..774 295 100 Plus
X 23542271 X 19186315..19186413 812..910 210 80.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4590026..4592300 950..3224 11330 99.8 Plus
3L 28103327 3L 4586578..4586785 513..720 1040 100 Plus
3L 28103327 3L 4589787..4589967 775..955 905 100 Plus
3L 28103327 3L 4578760..4578871 249..360 560 100 Plus
3L 28103327 3L 4563796..4563896 100..200 505 100 Plus
3L 28103327 3L 4556087..4556187 1..101 505 100 Plus
3L 28103327 3L 4580074..4580161 429..516 440 100 Plus
3L 28103327 3L 4579445..4579521 357..433 385 100 Plus
3L 28103327 3L 4588066..4588124 716..774 295 100 Plus
X 23527363 X 19194413..19194511 812..910 210 80.8 Plus
3L 28103327 3L 4577916..4577952 212..248 185 100 Plus
Blast to na_te.dros performed 2019-03-16 04:42:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Tel 2485 Dvir\Tel 2485bp Derived from AF009439 (Rel. 66, Last updated, Version 3). 1502..1565 1024..961 121 69.2 Minus

RE02540.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:43:17 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4579390..4579472 432..514 100 -> Plus
chr3L 4585890..4586093 515..718 100 -> Plus
chr3L 4587379..4587434 719..774 100 -> Plus
chr3L 4589097..4589277 775..955 100 -> Plus
chr3L 4589342..4589520 956..1134 100 == Plus
chr3L 4555412..4555511 1..100 100 -> Plus
chr3L 4563099..4563206 101..212 93 -> Plus
chr3L 4577230..4577265 213..248 100 -> Plus
chr3L 4578073..4578182 249..358 100 -> Plus
chr3L 4578760..4578832 359..431 100 -> Plus
chr3L 4589636..4591605 1250..3219 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:11:56 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG32245-RC 1..1197 83..1279 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:12:12 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG42540-RB 1..1197 83..1279 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:39:54 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG42540-RB 1..1197 83..1279 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:56:47 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG32245-RC 1..1197 83..1279 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:48:50 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG42540-RB 1..1197 83..1279 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:11:55 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG32245-RC 1..3219 1..3219 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:12:12 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG42540-RB 1..3219 1..3219 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:39:54 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG42540-RB 1..3219 1..3219 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:56:47 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG32245-RC 1..3219 1..3219 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:48:50 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
CG42540-RB 1..3219 1..3219 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:43:17 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4586580..4586783 515..718 100 -> Plus
3L 4588069..4588124 719..774 100 -> Plus
3L 4556087..4556186 1..100 100 -> Plus
3L 4563797..4563904 101..212 93 -> Plus
3L 4577917..4577952 213..248 100 -> Plus
3L 4578760..4578869 249..358 100 -> Plus
3L 4579447..4579519 359..431 100 -> Plus
3L 4580077..4580159 432..514 100 -> Plus
3L 4589787..4589967 775..955 100 -> Plus
3L 4590032..4592295 956..3219 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:43:17 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4586580..4586783 515..718 100 -> Plus
3L 4588069..4588124 719..774 100 -> Plus
3L 4556087..4556186 1..100 100 -> Plus
3L 4563797..4563904 101..212 93 -> Plus
3L 4577917..4577952 213..248 100 -> Plus
3L 4578760..4578869 249..358 100 -> Plus
3L 4579447..4579519 359..431 100 -> Plus
3L 4580077..4580159 432..514 100 -> Plus
3L 4589787..4589967 775..955 100 -> Plus
3L 4590032..4592295 956..3219 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:43:17 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4586580..4586783 515..718 100 -> Plus
3L 4588069..4588124 719..774 100 -> Plus
3L 4556087..4556186 1..100 100 -> Plus
3L 4563797..4563904 101..212 93 -> Plus
3L 4577917..4577952 213..248 100 -> Plus
3L 4578760..4578869 249..358 100 -> Plus
3L 4579447..4579519 359..431 100 -> Plus
3L 4580077..4580159 432..514 100 -> Plus
3L 4589787..4589967 775..955 100 -> Plus
3L 4590032..4592295 956..3219 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:39:54 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4588069..4588124 719..774 100 -> Plus
arm_3L 4589787..4589967 775..955 100 -> Plus
arm_3L 4563797..4563904 101..212 93 -> Plus
arm_3L 4577917..4577952 213..248 100 -> Plus
arm_3L 4578760..4578869 249..358 100 -> Plus
arm_3L 4579447..4579519 359..431 100 -> Plus
arm_3L 4580077..4580159 432..514 100 -> Plus
arm_3L 4586580..4586783 515..718 100 -> Plus
arm_3L 4556087..4556186 1..100 100 -> Plus
arm_3L 4590032..4592295 956..3219 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:32:07 Download gff for RE02540.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4590032..4592295 956..3219 99   Plus
3L 4556087..4556186 1..100 100 -> Plus
3L 4563797..4563904 101..212 93 -> Plus
3L 4577917..4577952 213..248 100 -> Plus
3L 4578760..4578869 249..358 100 -> Plus
3L 4579447..4579519 359..431 100 -> Plus
3L 4580077..4580159 432..514 100 -> Plus
3L 4586580..4586783 515..718 100 -> Plus
3L 4588069..4588124 719..774 100 -> Plus
3L 4589787..4589967 775..955 100 -> Plus

RE02540.pep Sequence

Translation from 82 to 1278

> RE02540.pep
MAAMSADIVPMEQVSSMVSNGGGSVAMQRDDEYRNRIMKIRRLDTQAKHS
HGFLYSDEEISDKASTCGKLLIFLSVALVIMTLPFSLFVCFKVVQEYERA
VIFRLGRLMQGGAKGPGIFFILPCIDSYARVDLRTRTYDVPPQEVLTKDS
VTVSVDAVVYYRVSNATVSIANVENAHHSTRLLAQTTLRNTMGTRHLHEI
LSERMTISGTMQVQLDEATDAWGIKVERVEIKDVRLPVQLQRAMAAEAEA
AREARAKVIAAEGEQKASRALREASEVIGDSPAALQLRYLQTLNTISAEK
NSTIVFPLPIDLITYFLKTNEATTQQNARAAAAAIGNTPPPLQLAPQQQM
GQQQQPQYQQPQQQQQQYQPQQQQQQQQQQPQQQDQLYQQGQQISSAM*

RE02540.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25082-PA 695 GF25082-PA 343..639 42..338 1418 98.3 Plus
Dana\GF15940-PA 378 GF15940-PA 75..328 67..319 886 69.7 Plus
Dana\GF15941-PA 353 GF15941-PA 67..317 67..317 813 66.3 Plus
Dana\GF17229-PA 456 GF17229-PA 58..314 61..318 654 48.8 Plus
Dana\GF13229-PA 295 GF13229-PA 38..295 62..318 643 46.5 Plus
Dana\GF25082-PA 695 GF25082-PA 18..50 7..39 177 97 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:55:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15239-PA 413 GG15239-PA 24..413 7..398 1988 97.2 Plus
Dere\GG19210-PA 365 GG19210-PA 68..322 67..320 891 69.8 Plus
Dere\GG19211-PA 350 GG19211-PA 42..314 41..317 827 62.9 Plus
Dere\GG11730-PA 293 GG11730-PA 44..293 69..318 667 49.2 Plus
Dere\GG18608-PA 483 GG18608-PA 51..310 62..322 645 46.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:55:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15690-PA 391 GH15690-PA 1..310 11..324 1553 97.8 Plus
Dgri\GH12518-PA 349 GH12518-PA 72..326 67..320 899 70.2 Plus
Dgri\GH11833-PA 344 GH11833-PA 75..321 70..317 768 68.1 Plus
Dgri\GH23142-PA 303 GH23142-PA 53..303 70..318 725 53.4 Plus
Dgri\GH17310-PA 402 GH17310-PA 48..379 48..376 717 41.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG42540-PB 398 CG32245-PC 1..398 1..398 1990 100 Plus
CG42540-PI 409 CG42540-PI 18..409 7..398 1964 100 Plus
CG42540-PK 405 CG42540-PK 18..405 7..398 1926 98.7 Plus
CG42540-PC 397 CG32245-PA 18..397 7..398 1870 96.7 Plus
CG42540-PH 393 CG42540-PH 18..393 7..398 1848 95.7 Plus
CG42540-PG 517 CG42540-PG 161..517 42..398 1783 99.7 Plus
CG42540-PF 506 CG42540-PF 152..506 44..398 1780 100 Plus
CG42540-PJ 501 CG42540-PJ 143..501 43..398 1720 97.2 Plus
CG42540-PD 505 CG32245-PB 153..505 46..398 1712 97.7 Plus
CG33253-PC 302 CG33253-PC 7..302 70..386 950 63.1 Plus
CG33253-PA 367 CG33253-PA 72..367 70..386 950 63.1 Plus
CG33253-PB 414 CG33253-PB 72..367 70..386 950 63.1 Plus
Mec2-PA 350 CG7635-PA 68..333 70..348 852 62 Plus
CG14644-PA 293 CG14644-PA 40..293 66..318 634 48.8 Plus
CG14736-PD 455 CG14736-PD 44..309 55..321 626 46.8 Plus
CG14736-PG 473 CG14736-PG 44..309 55..321 626 46.8 Plus
CG14736-PE 473 CG14736-PE 44..309 55..321 626 46.8 Plus
CG31358-PB 474 CG31358-PB 30..282 69..323 604 44.7 Plus
CG31358-PA 474 CG31358-PA 30..282 69..323 604 44.7 Plus
CG14644-PB 225 CG14644-PB 1..225 94..318 566 48.9 Plus
CG14736-PF 335 CG14736-PF 1..189 133..321 453 46 Plus
Stoml2-PB 366 CG2970-PB 41..224 89..273 272 32.3 Plus
Stoml2-PA 366 CG2970-PA 41..224 89..273 272 32.3 Plus
CG42540-PF 506 CG42540-PF 1..43 1..43 210 100 Plus
CG42540-PJ 501 CG42540-PJ 18..50 7..39 166 100 Plus
CG18789-PA 398 CG18789-PA 269..351 316..393 162 49.4 Plus
CG32767-PG 1280 CG32767-PG 391..467 323..393 161 55.8 Plus
CG32767-PH 1281 CG32767-PH 391..467 323..393 161 55.8 Plus
CG32767-PF 1281 CG32767-PF 391..467 323..393 161 55.8 Plus
CG32767-PE 1281 CG32767-PE 391..467 323..393 161 55.8 Plus
CG32767-PD 1281 CG32767-PD 391..467 323..393 161 55.8 Plus
CG32767-PC 1281 CG32767-PC 391..467 323..393 161 55.8 Plus
CG15365-PC 821 CG15365-PC 549..624 319..394 158 51.3 Plus
CG15365-PC 821 CG15365-PC 532..610 319..394 158 46.8 Plus
CG15365-PA 821 CG15365-PA 532..610 319..394 158 46.8 Plus
CG15365-PA 821 CG15365-PA 549..624 319..394 158 51.3 Plus
CG15365-PB 828 CG15365-PB 539..617 319..394 158 46.8 Plus
CG15365-PB 828 CG15365-PB 556..631 319..394 158 51.3 Plus
Ptip-PA 2294 CG32133-PA 202..252 343..393 157 66.7 Plus
CG18789-PA 398 CG18789-PA 277..346 325..394 156 51.4 Plus
Ptip-PA 2294 CG32133-PA 214..268 343..397 156 65.5 Plus
CG18787-PB 398 CG18787-PB 269..351 316..393 153 47 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:55:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12741-PA 495 GI12741-PA 163..428 56..321 1329 99.2 Plus
Dmoj\GI14870-PA 339 GI14870-PA 62..330 67..342 915 67.5 Plus
Dmoj\GI14311-PA 351 GI14311-PA 67..347 67..360 896 59.5 Plus
Dmoj\GI18479-PA 295 GI18479-PA 46..295 71..318 707 52.8 Plus
Dmoj\GI10272-PA 299 GI10272-PA 64..295 61..286 612 49.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17909-PA 617 GL17909-PA 239..533 44..338 1433 96.6 Plus
Dper\GL12979-PA 354 GL12979-PA 75..319 74..318 888 71.8 Plus
Dper\GL12980-PA 369 GL12980-PA 69..331 51..317 832 65.3 Plus
Dper\GL17280-PA 310 GL17280-PA 61..310 69..318 715 50.8 Plus
Dper\GL22263-PA 393 GL22263-PA 81..335 62..317 693 48.4 Plus
Dper\GL17909-PA 617 GL17909-PA 91..127 7..43 196 97.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28535-PA 530 GA28535-PA 164..446 56..338 1360 96.1 Plus
Dpse\GA23068-PA 354 GA23068-PA 75..319 74..318 888 71.8 Plus
Dpse\GA20495-PA 369 GA20495-PA 69..331 51..317 833 65.3 Plus
Dpse\GA24162-PA 310 GA24162-PA 61..310 69..318 716 50.8 Plus
Dpse\GA27434-PA 393 GA27434-PA 81..335 62..317 700 48.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14671-PA 414 GM14671-PA 24..414 7..398 2062 99.7 Plus
Dsec\GM22946-PA 363 GM22946-PA 68..322 67..320 891 69.8 Plus
Dsec\GM22941-PA 261 GM22941-PA 10..257 67..314 806 66.3 Plus
Dsec\GM10718-PA 293 GM10718-PA 40..293 66..318 676 49.2 Plus
Dsec\GM23997-PA 476 GM23997-PA 50..304 62..317 661 48 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13852-PA 414 GD13852-PA 24..414 7..398 2062 99.7 Plus
Dsim\GD17427-PA 365 GD17427-PA 68..322 67..320 891 69.8 Plus
Dsim\GD17429-PA 350 GD17429-PA 43..333 42..348 828 58.4 Plus
Dsim\GD19693-PA 293 GD19693-PA 40..293 66..318 676 49.2 Plus
Dsim\GD18800-PA 475 GD18800-PA 51..305 62..317 659 48 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:56:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15511-PA 412 GJ15511-PA 18..332 7..321 1593 99 Plus
Dvir\GJ19534-PA 352 GJ19534-PA 78..332 67..320 908 71 Plus
Dvir\GJ19367-PA 347 GJ19367-PA 73..319 70..317 889 66.1 Plus
Dvir\GJ21340-PA 309 GJ21340-PA 59..309 70..318 714 52.6 Plus
Dvir\GJ11079-PA 317 GJ11079-PA 20..279 56..316 690 48.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:56:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16594-PA 513 GK16594-PA 144..440 42..338 1414 98 Plus
Dwil\GK25171-PA 359 GK25171-PA 77..331 67..320 898 70.2 Plus
Dwil\GK25172-PA 345 GK25172-PA 37..319 21..317 827 60.1 Plus
Dwil\GK19470-PA 296 GK19470-PA 20..296 40..318 777 52.3 Plus
Dwil\GK19468-PA 296 GK19468-PA 20..296 40..318 777 52.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:56:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21459-PA 528 GE21459-PA 170..469 42..341 1481 99.7 Plus
Dyak\GE17775-PA 374 GE17775-PA 68..322 67..320 891 69.8 Plus
Dyak\GE17776-PA 350 GE17776-PA 43..333 42..348 826 58.4 Plus
Dyak\GE25367-PA 293 GE25367-PA 40..293 66..318 671 49.6 Plus
Dyak\GE26158-PA 491 GE26158-PA 41..307 53..322 658 45.6 Plus

RE02540.hyp Sequence

Translation from 322 to 1278

> RE02540.hyp
MTLPFSLFVCFKVVQEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYAR
VDLRTRTYDVPPQEVLTKDSVTVSVDAVVYYRVSNATVSIANVENAHHST
RLLAQTTLRNTMGTRHLHEILSERMTISGTMQVQLDEATDAWGIKVERVE
IKDVRLPVQLQRAMAAEAEAAREARAKVIAAEGEQKASRALREASEVIGD
SPAALQLRYLQTLNTISAEKNSTIVFPLPIDLITYFLKTNEATTQQNARA
AAAAIGNTPPPLQLAPQQQMGQQQQPQYQQPQQQQQQYQPQQQQQQQQQQ
PQQQDQLYQQGQQISSAM*

RE02540.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG42540-PH 393 CG42540-PH 76..393 1..318 1594 100 Plus
CG42540-PC 397 CG32245-PA 80..397 1..318 1594 100 Plus
CG42540-PB 398 CG32245-PC 81..398 1..318 1594 100 Plus
CG42540-PK 405 CG42540-PK 88..405 1..318 1594 100 Plus
CG42540-PI 409 CG42540-PI 92..409 1..318 1594 100 Plus