BDGP Sequence Production Resources |
Search the DGRC for RE02926
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 29 |
Well: | 26 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG12310-RA |
Protein status: | RE02926.pep: gold |
Preliminary Size: | 537 |
Sequenced Size: | 484 |
Gene | Date | Evidence |
---|---|---|
CG12310 | 2001-12-17 | Blastp of sequenced clone |
CG12310 | 2002-01-01 | Sim4 clustering to Release 2 |
CG12310 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12310 | 2008-04-29 | Release 5.5 accounting |
CG12310 | 2008-08-15 | Release 5.9 accounting |
CG12310 | 2008-12-18 | 5.12 accounting |
484 bp (484 high quality bases) assembled on 2001-12-17
GenBank Submission: AY070923
> RE02926.complete AAAGCAGTTTTCGCGATAACTTCTTAGACTCAACTTCAAAATGCGTTCCC TGATTCTTGTCGCTCTTTTGGCCTTCTTGGCTGTTGGCTTTGTGGCTGCC CGTCCAGCTGAGGATGAGGAGTCCTCCGCTGCCGTGGTTGAGAATGCCGA TGAGGATTCGACTAGCAATGATGCGGAGAGCACCGAAGCCACTGATGCGG AGGAATCTTCTGATGATGAGGAGACGACTGAAGAGTCTGGTGATGCCGCT GACGAATCCAGCGATGATGCCGATGAGGATGAGACAACCACTGCAGCTTC GGCCAAGAAGCAGATCCGTCCCTTCTGGCCCAGGTTCGGAGGTCATGGTC CAGTTGTGATCAGGCGTCACCCTAGTCTTGTCTAGGTCAAAGCCCTATAG TCTTGATTGCTTAACTATTCCTTTCTATTTTCTAAATAAAAAATGTTATC TTTAACTCAAACTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
412 | 7567 | 412 412 7567bp | 2038..2089 | 433..383 | 104 | 69.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15040386..15040849 | 1..463 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 1..345 | 41..385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 1..345 | 41..385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 1..345 | 41..385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 1..345 | 41..385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 1..345 | 41..385 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 1..463 | 1..463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 1..463 | 1..463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 2..464 | 1..463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 1..463 | 1..463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12310-RA | 2..464 | 1..463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15050343..15050805 | 1..463 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15050343..15050805 | 1..463 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15050343..15050805 | 1..463 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15043443..15043905 | 1..463 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15043443..15043905 | 1..463 | 100 | Minus |
Translation from 40 to 384
> RE02926.pep MRSLILVALLAFLAVGFVAARPAEDEESSAAVVENADEDSTSNDAESTEA TDAEESSDDEETTEESGDAADESSDDADEDETTTAASAKKQIRPFWPRFG GHGPVVIRRHPSLV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10749-PA | 115 | GF10749-PA | 1..107 | 1..109 | 212 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13692-PA | 118 | GG13692-PA | 1..113 | 1..114 | 424 | 76.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12310-PA | 114 | CG12310-PA | 1..114 | 1..114 | 568 | 100 | Plus |
CG13461-PA | 137 | CG13461-PA | 1..133 | 1..111 | 192 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25877-PA | 128 | GL25877-PA | 1..125 | 1..114 | 202 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23647-PA | 128 | GA23647-PA | 1..125 | 1..114 | 202 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24511-PA | 130 | GM24511-PA | 1..129 | 1..114 | 171 | 38.4 | Plus |
Dsec\GM24512-PA | 41 | GM24512-PA | 1..39 | 1..39 | 168 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12583-PA | 115 | GD12583-PA | 1..114 | 1..114 | 412 | 88.6 | Plus |
Dsim\GD12582-PA | 130 | GD12582-PA | 1..129 | 1..114 | 186 | 41.4 | Plus |
Translation from 40 to 384
> RE02926.hyp MRSLILVALLAFLAVGFVAARPAEDEESSAAVVENADEDSTSNDAESTEA TDAEESSDDEETTEESGDAADESSDDADEDETTTAASAKKQIRPFWPRFG GHGPVVIRRHPSLV*