BDGP Sequence Production Resources |
Search the DGRC for RE03010
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 30 |
Well: | 10 |
Vector: | pFlc-1 |
Associated Gene/Transcript | fng-RA |
Protein status: | RE03010.pep: gold |
Sequenced Size: | 1980 |
Gene | Date | Evidence |
---|---|---|
CG10580 | 2001-12-14 | Blastp of sequenced clone |
CG10580 | 2002-01-01 | Sim4 clustering to Release 2 |
CG10580 | 2003-01-01 | Sim4 clustering to Release 3 |
fng | 2008-04-29 | Release 5.5 accounting |
fng | 2008-08-15 | Release 5.9 accounting |
fng | 2008-12-18 | 5.12 accounting |
1980 bp (1980 high quality bases) assembled on 2001-12-14
GenBank Submission: AY070927
> RE03010.complete AGTGGCTTTTCAAGCTTGCCACAAGCAAGACGTCAGTGCGCGCGTGCTGC GATATCGAAATCGAAATAAACTTAAAAGATATCGTAATTTCAGAAATCGA GCAGAATTCATACGATCCAGGAAAAGAACCAGCTAATATTGGAATATAAA ACCTACCCAGTGATCAAATCGGCGGTGCTTCAATGTGCGCGTAGTGGTCC GTAACCGTATGATGAGCCTGACTGTGCTCTCGCCACCGCAACGTTTTAAG CGAATCCTGCAAGCCATGATGTTAGCCGTCGCCGTCGTCTATATGACCCT ACTGCTCTACCAGAGCGCCTACGGATATCCGGGCATCCAAGTGCCGCACA GCCAGGTGGATGCCCTTGCCAGCGAAGCCGTGACCACACATCGCGACCAG CTGCTCCAGGACTACGTGCAGTCCTCCACGCCCACCCAGCCGGGGGCTGG AGCTCCGGCCGCCTCCCCCACCACCGTCATAATCCGCAAGGATATACGCA GCTTCAATTTCAGCGACATCGAGGTCAGTGAGCGGCCCACGGCCACGCTG CTAACAGAATTGGCCAGAAGGAGCCGGAATGGGGAACTGCTCCGCGATCT GTCCCAAAGAGCGGTGACGGCGACACCACAGCCGCCGGTCACCGAGTTGG ATGACATTTTCATCAGCGTAAAGACGACGAAGAACTATCACGACACCCGG CTGGCGTTGATCATCAAGACCTGGTTCCAATTGGCCCGCGATCAGACCTG GTTCTTCACGGACACCGATGATCACTACTACCAGGAGAAGACAAAGGGCC ATCTCATCAACACGAAATGCTCACAGGGCCATTTTCGCAAGGCGCTTTGC TGCAAAATGTCCGCTGAATTGGATGTCTTCCTGGAGAGTGGCAAAAAGTG GTTCTGTCACTTCGACGATGACAACTATGTCAATGTGCCGAGGCTGGTCA AACTGCTGGACGAGTATAGCCCCAGTGTGGATTGGTATCTGGGCAAGCCG AGCATCTCGTCGCCGCTGGAGATCCACTTGGACAGCAAGAACACGACAAC AAACAAGAAGATAACCTTCTGGTTCGCCACTGGCGGCGCTGGCTTCTGCC TCAGTCGAGCCCTGACTTTAAAAATGCTACCCATAGCAGGTGGTGGCAAG TTTATCAGCATTGGCGACAAGATACGTTTTCCGGATGATGTCACAATGGG TTTTATTATTGAACACCTTCTGAAAGTTCCTCTAACCGTGGTGGACAACT TCCACTCGCATTTGGAGCCCATGGAGTTCATACGCCAGGATACGTTCCAG GACCAGGTGTCCTTCAGCTATGCCCACATGAAAAACCAGTGGAACGTGAT CAAGGTGGACGGCTTCGATATGAAAACCGATCCCAAGCGCTTCTACTCCC TGCACTGCCAGCTTTTCCCCTACTTCAGCTTCTGCCCGCCCAGATGAACT GGTTGATCCCGATCCGAGGTCCCTGGGGATCCTATTTGGCTGTTGCAGGC GCACGTCTGCACTGGGTCGGTTGTGAACCGCTGGGGCAGGCGTCAAAATC AAATCTCGCCACTGTGATTTAACATTAAGTTTATAGTATACGAGCAACGA AAGGTTCTTTGTATATATATATGTAGCAATACGCTGGACAGATGTGCTTC CTAATGGTATAAGTAATACTGTAGCTGTAGGTCTTGCAATTCCAACACTT CCAAGTGCTTCCCTATAGCGTTACACGCGATTCTTCCAATCGGCTTAGTG CGTAGTTAAATTAATGGTCTAGTCTACGTTTAAGTTATCTTAGATTCAGA GAGACCGCTTGACCCTCTGCTGTGTAATACTGTAATGCAGTCTAATGTTT GCCTAATCTAGCAATATGCATGTATATAGTAGATTAATTAACTAAGCAAT GTTTAAACCATTTTGTTAATTTTTAGTTTGCTTGAATAAAACAGAATATT TTATTGAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20914895..20915640 | 1956..1211 | 3730 | 100 | Minus |
chr3L | 24539361 | chr3L | 20932570..20932974 | 745..341 | 2025 | 100 | Minus |
chr3L | 24539361 | chr3L | 20938171..20938513 | 343..1 | 1700 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 20915703..20915877 | 1211..1037 | 875 | 100 | Minus |
chr3L | 24539361 | chr3L | 20916713..20916851 | 1036..898 | 695 | 100 | Minus |
chr3L | 24539361 | chr3L | 20924417..20924521 | 899..795 | 525 | 100 | Minus |
chr3L | 24539361 | chr3L | 20925672..20925723 | 794..743 | 260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20925886..20926636 | 1961..1211 | 3755 | 100 | Minus |
3L | 28110227 | 3L | 20943564..20943968 | 745..341 | 2025 | 100 | Minus |
3L | 28110227 | 3L | 20949167..20949509 | 343..1 | 1700 | 99.7 | Minus |
3L | 28110227 | 3L | 20926699..20926873 | 1211..1037 | 875 | 100 | Minus |
3L | 28110227 | 3L | 20927709..20927847 | 1036..898 | 695 | 100 | Minus |
3L | 28110227 | 3L | 20935411..20935515 | 899..795 | 525 | 100 | Minus |
3L | 28110227 | 3L | 20936666..20936717 | 794..743 | 260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20918986..20919736 | 1961..1211 | 3755 | 100 | Minus |
3L | 28103327 | 3L | 20936664..20937068 | 745..341 | 2025 | 100 | Minus |
3L | 28103327 | 3L | 20942267..20942609 | 343..1 | 1700 | 99.7 | Minus |
3L | 28103327 | 3L | 20919799..20919973 | 1211..1037 | 875 | 100 | Minus |
3L | 28103327 | 3L | 20920809..20920947 | 1036..898 | 695 | 100 | Minus |
3L | 28103327 | 3L | 20928511..20928615 | 899..795 | 525 | 100 | Minus |
3L | 28103327 | 3L | 20929766..20929817 | 794..743 | 260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20914895..20915639 | 1212..1956 | 100 | <- | Minus |
chr3L | 20915703..20915877 | 1037..1211 | 100 | <- | Minus |
chr3L | 20916713..20916851 | 898..1036 | 100 | <- | Minus |
chr3L | 20924419..20924521 | 795..897 | 100 | <- | Minus |
chr3L | 20925672..20925720 | 746..794 | 100 | <- | Minus |
chr3L | 20932570..20932974 | 341..745 | 100 | <- | Minus |
chr3L | 20938174..20938513 | 1..340 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 1..1239 | 209..1447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 1..1239 | 209..1447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 1..1239 | 209..1447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 1..1239 | 209..1447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 1..1239 | 209..1447 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 1..1956 | 1..1956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 1..1956 | 1..1956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 4..1959 | 1..1956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 1..1956 | 1..1956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fng-RA | 4..1959 | 1..1956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20925891..20926635 | 1212..1956 | 100 | <- | Minus |
3L | 20926699..20926873 | 1037..1211 | 100 | <- | Minus |
3L | 20927709..20927847 | 898..1036 | 100 | <- | Minus |
3L | 20935413..20935515 | 795..897 | 100 | <- | Minus |
3L | 20936666..20936714 | 746..794 | 100 | <- | Minus |
3L | 20943564..20943968 | 341..745 | 100 | <- | Minus |
3L | 20949170..20949509 | 1..340 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20925891..20926635 | 1212..1956 | 100 | <- | Minus |
3L | 20926699..20926873 | 1037..1211 | 100 | <- | Minus |
3L | 20927709..20927847 | 898..1036 | 100 | <- | Minus |
3L | 20935413..20935515 | 795..897 | 100 | <- | Minus |
3L | 20936666..20936714 | 746..794 | 100 | <- | Minus |
3L | 20943564..20943968 | 341..745 | 100 | <- | Minus |
3L | 20949170..20949509 | 1..340 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20925891..20926635 | 1212..1956 | 100 | <- | Minus |
3L | 20926699..20926873 | 1037..1211 | 100 | <- | Minus |
3L | 20927709..20927847 | 898..1036 | 100 | <- | Minus |
3L | 20935413..20935515 | 795..897 | 100 | <- | Minus |
3L | 20936666..20936714 | 746..794 | 100 | <- | Minus |
3L | 20943564..20943968 | 341..745 | 100 | <- | Minus |
3L | 20949170..20949509 | 1..340 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20936664..20937068 | 341..745 | 100 | <- | Minus |
arm_3L | 20942270..20942609 | 1..340 | 99 | Minus | |
arm_3L | 20918991..20919735 | 1212..1956 | 100 | <- | Minus |
arm_3L | 20919799..20919973 | 1037..1211 | 100 | <- | Minus |
arm_3L | 20920809..20920947 | 898..1036 | 100 | <- | Minus |
arm_3L | 20928513..20928615 | 795..897 | 100 | <- | Minus |
arm_3L | 20929766..20929814 | 746..794 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20942270..20942609 | 1..340 | 99 | Minus | |
3L | 20936664..20937068 | 341..745 | 100 | <- | Minus |
3L | 20918991..20919735 | 1212..1956 | 100 | <- | Minus |
3L | 20919799..20919973 | 1037..1211 | 100 | <- | Minus |
3L | 20920809..20920947 | 898..1036 | 100 | <- | Minus |
3L | 20928513..20928615 | 795..897 | 100 | <- | Minus |
3L | 20929766..20929814 | 746..794 | 100 | <- | Minus |
Translation from 208 to 1446
> RE03010.pep MMSLTVLSPPQRFKRILQAMMLAVAVVYMTLLLYQSAYGYPGIQVPHSQV DALASEAVTTHRDQLLQDYVQSSTPTQPGAGAPAASPTTVIIRKDIRSFN FSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQPPVTELDDI FISVKTTKNYHDTRLALIIKTWFQLARDQTWFFTDTDDHYYQEKTKGHLI NTKCSQGHFRKALCCKMSAELDVFLESGKKWFCHFDDDNYVNVPRLVKLL DEYSPSVDWYLGKPSISSPLEIHLDSKNTTTNKKITFWFATGGAGFCLSR ALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFIIEHLLKVPLTVVDNFHS HLEPMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDGFDMKTDPKRFYSLHC QLFPYFSFCPPR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10199-PA | 413 | GF10199-PA | 1..413 | 1..412 | 2138 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13275-PA | 412 | GG13275-PA | 1..412 | 1..412 | 2219 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15563-PA | 430 | GH15563-PA | 1..430 | 1..412 | 1884 | 85.6 | Plus |
Dgri\GH22426-PA | 206 | GH22426-PA | 67..157 | 89..179 | 440 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fng-PA | 412 | CG10580-PA | 1..412 | 1..412 | 2182 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16838-PA | 423 | GI16838-PA | 1..423 | 1..412 | 1913 | 85.8 | Plus |
Dmoj\GI21894-PA | 226 | GI21894-PA | 1..44 | 2..45 | 201 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14480-PA | 103 | GL14480-PA | 1..102 | 277..378 | 379 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10411-PA | 429 | GA10411-PA | 1..429 | 1..412 | 2034 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22178-PA | 412 | GM22178-PA | 1..412 | 1..412 | 2225 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12155-PA | 918 | GD12155-PA | 1..44 | 1..44 | 229 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12588-PA | 426 | GJ12588-PA | 1..426 | 1..412 | 1886 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13485-PA | 411 | GK13485-PA | 1..411 | 1..412 | 2008 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22371-PA | 412 | GE22371-PA | 1..412 | 1..412 | 2219 | 99.5 | Plus |
Translation from 208 to 1446
> RE03010.hyp MMSLTVLSPPQRFKRILQAMMLAVAVVYMTLLLYQSAYGYPGIQVPHSQV DALASEAVTTHRDQLLQDYVQSSTPTQPGAGAPAASPTTVIIRKDIRSFN FSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQPPVTELDDI FISVKTTKNYHDTRLALIIKTWFQLARDQTWFFTDTDDHYYQEKTKGHLI NTKCSQGHFRKALCCKMSAELDVFLESGKKWFCHFDDDNYVNVPRLVKLL DEYSPSVDWYLGKPSISSPLEIHLDSKNTTTNKKITFWFATGGAGFCLSR ALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFIIEHLLKVPLTVVDNFHS HLEPMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDGFDMKTDPKRFYSLHC QLFPYFSFCPPR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fng-PA | 412 | CG10580-PA | 1..412 | 1..412 | 2182 | 100 | Plus |