BDGP Sequence Production Resources |
Search the DGRC for RE03134
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 31 |
Well: | 34 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG2875-RB |
Protein status: | RE03134.pep: gold |
Sequenced Size: | 1681 |
Gene | Date | Evidence |
---|---|---|
CG2875-RB | 2010-11-11 | Gleaning Pick By Joe Carlson |
1681 bp assembled on 2010-12-09
GenBank Submission: BT125835.1
> RE03134.complete AACTCTGTGGAAGCACGCGGCATAAATTCATCTTATTTTTGTTTGTTGCG CATAATTAATATGTTTTAGCGTACATTTGCCAAACCGAAAATGAAACCCT TAACTGTGAAAGTGAACGATGACACCGGCAAGTCTTTGGCTAAGAAGAAG CTGCAGTCCAAGGCCAATTCCCTGCTAAATGCCGAGCAAGTGGACATCAA AACGCTCAAGGGATTCGTACAATTGCTGAATACGCCCGATAATATGCCAG CTGGCGAGGTGATGAATACACTCGAGGTGATATTCAAGAATCTGCTAAAA CGAAAGGCAATCGACGGCACCGAAAAGCAGGGTCTCAAAATCAAAAAACT GTACGAGGAAACTTGGTTGCTTCTCATCGAGAATCTACTGGTTGACTCGC AGTGTTCGGTTGCTGTAAAAGTGTGCATGCAGCTCATCAAAGTGGAGGCC AAGCATCCCATAGCACCCAACAAGGGTTGGCCCACCTACTGGATTCGCGG CATGCTGGAAACCCTAATAAATAGCGATACAACGCCCACAACAGCGCTGG CAAACTATGGGAAATATTGCAAAAATCTCGATGTATTAGAGATAACCCTG ACGCAATTGAAATCCTTAGTGCCCGATGAAGACTTCAAGGACAGCCCCAT TAAGGCCATGAACTTTCTATCCATTGTAAACCTCTTGGATATGGGAAAGT CTGTGCTGAGCACGGCAGATTACCACGTGGAAAGCGCCAAAAAGCAGACT TTTAACTACGAGTTAAATCGCAAAAGACTGAATAATCTCTGGGCGACTAT TATGGCAAAGGGCAACGAAGTGGACGAGAAACTGCATCGTCAAATACTTG TGGTGCTTCTGGAGCGCGTAATCAACCACCTGAACGATCCCATCCAGCTG ACCGACTTTCTCATGGACTCCCTCCATCAGTTTGATGGCCCCATTGCCTT GCTGGCTCTTCAGGGAATCTTTACGCTTATGCAAAAGCAGAATATCACCT ATCCGGATGTGTATGAGAAGCTGTACAATATGTTCTATCCACGGATGTTC CACAACAAGTACAAGGCACGCCTGTTTTACTTGGCCGATATCTTTCTGAC CTCCACCCATTTGCCCGAGAATCTGGTGGCGGCATTCGTTAAGCGTCTCG CTCGCCTGGCCCTTCAATCGCCGACCGAAGATGCTGTTATTATGATTCGA TTCGTTTGCAATCTGCTATTGAGACATACTGGATTGCAGAAATTGATTCG CGCCAGCCATGCAGTCGATGAGGTCAGCGATCCTTACAATCAAACAGAAA CGGATCCCGTCAAATCGGAGGCCATAAACAGTTCGCTGTGGGAAATTACG TTGCTGCAGAAACACGTTGTACCAGAGGTGGCCAATGCGGCACGGTTTAT TAACTCATCGCTGCCCGTAATGGAATTCGACTTAGCACCCCTCTTGGACA GAAAGGAATGCAATATTTTCGACGACGAATTACAGTCGAAGGCCAAACAA TTTGCTCTGAACTACGAACGTCCTACCAATTTGGCTTTGCCTAAAAACCA ATTCGTGACCAAATACTGGGACCTCATCTAGATTAGTGTTACTATTGCTA AGTTTAAGCAGGATTAAAGTGCTGCCTGTTATTGGGCTGCTGATGTGCCA ATTCGGCCTGAAATCAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 3466025..3466731 | 934..228 | 3520 | 99.9 | Minus |
chrX | 22417052 | chrX | 3465432..3465962 | 1464..934 | 2655 | 100 | Minus |
chrX | 22417052 | chrX | 3466798..3467025 | 228..1 | 1140 | 100 | Minus |
chrX | 22417052 | chrX | 3465169..3465367 | 1663..1465 | 995 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 3572595..3573301 | 934..228 | 3535 | 100 | Minus |
X | 23542271 | X | 3572003..3572533 | 1464..934 | 2655 | 100 | Minus |
X | 23542271 | X | 3573368..3573595 | 228..1 | 1140 | 100 | Minus |
X | 23542271 | X | 3571737..3571939 | 1667..1465 | 1000 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 3580693..3581399 | 934..228 | 3535 | 100 | Minus |
X | 23527363 | X | 3580101..3580631 | 1464..934 | 2655 | 100 | Minus |
X | 23527363 | X | 3581466..3581693 | 228..1 | 1140 | 100 | Minus |
X | 23527363 | X | 3579835..3580037 | 1667..1465 | 1000 | 99.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 3465167..3465367 | 1465..1665 | 99 | <- | Minus |
chrX | 3465432..3465961 | 935..1464 | 100 | <- | Minus |
chrX | 3466025..3466730 | 229..934 | 99 | <- | Minus |
chrX | 3466798..3467025 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RB | 1..1491 | 91..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RB | 1..1491 | 91..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RB | 1..1491 | 91..1581 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RB | 26..1689 | 1..1665 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RB | 28..1691 | 1..1665 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2875-RB | 28..1691 | 1..1665 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3571739..3571939 | 1465..1665 | 99 | <- | Minus |
X | 3572003..3572532 | 935..1464 | 100 | <- | Minus |
X | 3572595..3573300 | 229..934 | 100 | <- | Minus |
X | 3573368..3573595 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3571739..3571939 | 1465..1665 | 99 | <- | Minus |
X | 3572003..3572532 | 935..1464 | 100 | <- | Minus |
X | 3572595..3573300 | 229..934 | 100 | <- | Minus |
X | 3573368..3573595 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3571739..3571939 | 1465..1665 | 99 | <- | Minus |
X | 3572003..3572532 | 935..1464 | 100 | <- | Minus |
X | 3572595..3573300 | 229..934 | 100 | <- | Minus |
X | 3573368..3573595 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 3466036..3466565 | 935..1464 | 100 | <- | Minus |
arm_X | 3465772..3465972 | 1465..1665 | 99 | <- | Minus |
arm_X | 3466628..3467333 | 229..934 | 100 | <- | Minus |
arm_X | 3467401..3467628 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3579837..3580037 | 1465..1665 | 99 | <- | Minus |
X | 3580101..3580630 | 935..1464 | 100 | <- | Minus |
X | 3580693..3581398 | 229..934 | 100 | <- | Minus |
X | 3581466..3581693 | 1..228 | 100 | Minus |
Translation from 90 to 1580
> RE03134.pep MKPLTVKVNDDTGKSLAKKKLQSKANSLLNAEQVDIKTLKGFVQLLNTPD NMPAGEVMNTLEVIFKNLLKRKAIDGTEKQGLKIKKLYEETWLLLIENLL VDSQCSVAVKVCMQLIKVEAKHPIAPNKGWPTYWIRGMLETLINSDTTPT TALANYGKYCKNLDVLEITLTQLKSLVPDEDFKDSPIKAMNFLSIVNLLD MGKSVLSTADYHVESAKKQTFNYELNRKRLNNLWATIMAKGNEVDEKLHR QILVVLLERVINHLNDPIQLTDFLMDSLHQFDGPIALLALQGIFTLMQKQ NITYPDVYEKLYNMFYPRMFHNKYKARLFYLADIFLTSTHLPENLVAAFV KRLARLALQSPTEDAVIMIRFVCNLLLRHTGLQKLIRASHAVDEVSDPYN QTETDPVKSEAINSSLWEITLLQKHVVPEVANAARFINSSLPVMEFDLAP LLDRKECNIFDDELQSKAKQFALNYERPTNLALPKNQFVTKYWDLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22308-PA | 497 | GF22308-PA | 1..497 | 1..496 | 1962 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18574-PA | 497 | GG18574-PA | 1..497 | 1..496 | 2355 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12543-PA | 513 | GH12543-PA | 12..513 | 20..496 | 1391 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2875-PC | 496 | CG2875-PC | 1..496 | 1..496 | 2545 | 100 | Plus |
CG2875-PB | 496 | CG2875-PB | 1..496 | 1..496 | 2545 | 100 | Plus |
CG2875-PA | 497 | CG2875-PA | 1..497 | 1..496 | 2533 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14900-PA | 515 | GI14900-PA | 29..515 | 21..496 | 1524 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15786-PA | 476 | GL15786-PA | 9..476 | 13..496 | 1294 | 54 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15496-PA | 494 | GA15496-PA | 9..494 | 13..496 | 1404 | 56.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12718-PA | 497 | GM12718-PA | 1..497 | 1..496 | 2448 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11637-PA | 129 | GD11637-PA | 1..129 | 368..496 | 667 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15331-PA | 483 | GJ15331-PA | 27..483 | 20..496 | 1468 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25035-PA | 530 | GK25035-PA | 28..530 | 21..496 | 1416 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16887-PA | 497 | GE16887-PA | 1..497 | 1..496 | 2352 | 89.7 | Plus |
Translation from 90 to 1580
> RE03134.hyp MKPLTVKVNDDTGKSLAKKKLQSKANSLLNAEQVDIKTLKGFVQLLNTPD NMPAGEVMNTLEVIFKNLLKRKAIDGTEKQGLKIKKLYEETWLLLIENLL VDSQCSVAVKVCMQLIKVEAKHPIAPNKGWPTYWIRGMLETLINSDTTPT TALANYGKYCKNLDVLEITLTQLKSLVPDEDFKDSPIKAMNFLSIVNLLD MGKSVLSTADYHVESAKKQTFNYELNRKRLNNLWATIMAKGNEVDEKLHR QILVVLLERVINHLNDPIQLTDFLMDSLHQFDGPIALLALQGIFTLMQKQ NITYPDVYEKLYNMFYPRMFHNKYKARLFYLADIFLTSTHLPENLVAAFV KRLARLALQSPTEDAVIMIRFVCNLLLRHTGLQKLIRASHAVDEVSDPYN QTETDPVKSEAINSSLWEITLLQKHVVPEVANAARFINSSLPVMEFDLAP LLDRKECNIFDDELQSKAKQFALNYERPTNLALPKNQFVTKYWDLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2875-PC | 496 | CG2875-PC | 1..496 | 1..496 | 2545 | 100 | Plus |
CG2875-PB | 496 | CG2875-PB | 1..496 | 1..496 | 2545 | 100 | Plus |
CG2875-PA | 497 | CG2875-PA | 1..497 | 1..496 | 2533 | 99.8 | Plus |