Clone RE03232 Report

Gene	Date	Evidence
bcd	2008-04-29	Release 5.5 accounting
bcd	2008-08-15	Release 5.9 accounting
bcd	2008-12-18	5.12 accounting

Clone Sequence Records

RE03232.complete Sequence

2461 bp (2461 high quality bases) assembled on 2004-08-14

GenBank Submission: BT021332

> RE03232.complete
GAAATAAGTTCGCGAGCGTCTCGAAAGTAACCGGTTACTGAAAATACAAG
AAAGTTTCCACACTCCTTTGCCATTTTTCCGCGCGGCGCTTGGAAATTCG
TAAAGATAACGCGGCGGAGTGTTTGGGGAAAATGGCGCAACCGCCGCCAG
ATCAAAACTTTTACCATCATCCGCTGCCCCACACGCACACACATCCGCAT
CCGCACTCCCATCCGCATCCGCACTCGCATCCGCACCCACATCACCAACA
TCCGCAGCTTCAGTTGCCGCCACAATTCCGAAATCCCTTCGATTTGCTTT
TCGATGAGCGAACGGGAGCGATAAACTACAACTACATACGTCCGTATCTG
CCCAACCAGATGCCCAAGCCAGATGTCTTTCCCTCAGAGGAGCTGCCCGA
CTCTCTGGTGATGCGGCGACCACGTCGCACCCGCACCACTTTTACCAGCT
CTCAAATAGCAGAGCTGGAGCAGCACTTTCTGCAGGGACGATACCTCACA
GCCCCCCGACTTGCGGATCTGTCAGCGAAACTAGCCCTGGGCACAGCCCA
GGTGAAGATATGGTTTAAGAACCGTCGGCGTCGTCACAAGATCCAATCGG
ATCAGCACAAGGACCAGTCCTACGAGGGGATGCCTCTCTCGCCGGGTATG
AAACAGAGCGATGGCGATCCCCCCAGCTTGCAGACTCTTAGCTTGGGTGG
AGGAGCCACGCCCAACGCTTTGACTCCGTCACCCACGCCCTCAACGCCCA
CTGCACACATGACGGAGCACTACAGCGAGTCATTCAACGCCTACTACAAC
TACAATGGAGGCCACAATCACGCCCAGGCCAATCGTCACATGCACATGCA
GTATCCTTCCGGAGGGGGGCCAGGACCTGGGTCGACCAATGTCAATGGCG
GCCAGTTCTTCCAGCAGCAGCAGGTCCATAATCACCAGCAGCAACTGCAC
CACCAGGGCAACCACGTGCCGCACCAGATGCAGCAGCAGCAACAGCAGGC
TCAGCAGCAGCAATACCATCACTTTGACTTCCAGCAAAAGCAAGCCAGCG
CCTGTCGCGTCCTGGTCAAGGACGAACCGGAGGCCGACTACAACTTCAAC
AGCTCGTACTACATGCGATCGGGAATGTCTGGCGCCACTGCATCGGCATC
CGCTGTGGCCCGAGGCGCTGCCTCGCCGGGCTCCGAGGTCTACGAGCCAT
TAACACCCAAGAATGACGAAAGTCCGAGTCTGTGTGGCATCGGCATCGGC
GGACCTTGCGCCATCGCCGTTGGCGAGACGGAGGCGGCCGACGACATGGA
CGACGGAACGAGCAAGAAGACGACGCTACAGATCTTGGAGCCTTTGAAGG
GTCTGGACAAGAGCTGCGACGATGGCAGTAGCGACGACATGAGCACCGGA
ATAAGAGCCTTAGCAGGAACCGGAAATCGTGGAGCGGCATTTGCCAAATT
TGGCAAGCCTTCGCCCCCACAAGGCCCTCAGCCGCCCCTCGGAATGGGGG
GCGTGGCCATGGGCGAATCGAACCAATATCAATGCACGATGGATACGATA
ATGCAAGCGTATAATCCCCATCGGAACGCCGCGGGCAACTCGCAGTTTGC
CTACTGCTTCAATTAGCCTGGATGAGAGGCGTGTTAGAGAGTTTCATTAG
CTTTAGGTTAACCACTGTTGTTCCTGATTGTACAAATACCAAGTGATTGT
AGATATCTACGCGTAGAAAGTTAGGTCTAGTCCTAAGATCCGTGTAAATG
GTTCCCAGGGAAGTTTTATGTACTAGCCTAGTCAGCAGGCCGCACGGATT
CCAGTGCATATCTTAGTGATACTCCAGTTAACTCTATACTTTCCCTGCAA
TACGCTATTCGCCTTAGATGTATCTGGGTGGCTGCTCCACTAAAGCCCGG
GAATATGCAACCAGTTACATTTGAGGCCATTTGGGCTTAAGCGTATTCCA
TGGAAAGTTATCGTCCCACATTTCGGAAATTATATTCCGAGCCAGCAAGA
AAATCTTCTCTGTTACAATTTGACATAGCTAAAAACTGTACTAATCAAAA
TGAAAAATGTTTCTCTTGGGCGTAATCTCATACAATGATTACCCTTAAAG
ATCGAACATTTAAACAATAATATTTGATATGATATTTTCAATTTCTATGC
TATGCCAAAGTGTCTGACATAATCAAACATTTGCGCATTCTTTGACCAAG
AATAGTCAGCAAATTGTATTTTCAATCAATGCAGACCATTTGTTTCAGAT
TCGGAGATTTTTTGCTGCCAAACGGAATAACTATCATAGCTCACATTCTA
TTTACATCACTAAGAAGAGCATTGCAATCTGTTAGGCCTCAAGTTTAATT
TTAAAATGCTGCACCTTTGATGTTGTCTCTTTAAGCTTTGTATTTTTAAT
TACGAAAATATATAAGAACTACTCTACTCGGGTAAATTGTGACTAACTAC
AAAAAAAAAAA

RE03232.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:58:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
bcd-RG	2525	bcd-RG	76..2525	1..2450	12250	100	Plus
bcd-RE	2547	bcd-RE	393..2547	296..2450	10775	100	Plus
bcd-RF	2532	bcd-RF	467..2532	385..2450	10330	100	Plus
bcd-RE	2547	bcd-RE	76..371	1..296	1480	100	Plus
bcd-RF	2532	bcd-RF	76..371	1..296	1480	100	Plus
bcd-RF	2532	bcd-RF	393..470	296..373	390	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:17:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr3R	27901430	chr3R	2581622..2582742	2450..1330	5590	99.9	Minus
chr3R	27901430	chr3R	2583253..2584214	1331..370	4810	100	Minus
chr2RHet	3288813	chr2RHet	2909356..2910029	1043..370	3310	99.4	Minus
chr3R	27901430	chr3R	2584887..2585182	296..1	1480	100	Minus
chr2RHet	3288813	chr2RHet	2910705..2910978	293..20	1310	98.5	Minus
chr3R	27901430	chr3R	2584252..2584328	372..296	385	100	Minus
chr2RHet	3288813	chr2RHet	2910067..2910143	372..296	385	100	Minus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:26:32 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:16:57

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	32079331	3R	6755841..6756962	2451..1330	5610	100	Minus
3R	32079331	3R	6757473..6758434	1331..370	4810	100	Minus
3L	28110227	3L	27540974..27541647	370..1043	3310	99.4	Plus
3L	28110227	3L	27850063..27850736	370..1043	3310	99.4	Plus
3R	32079331	3R	6759107..6759402	296..1	1480	100	Minus
3L	28110227	3L	27849114..27849387	20..293	1310	98.5	Plus
3L	28110227	3L	27540025..27540298	20..293	1310	98.5	Plus
3R	32079331	3R	6758472..6758548	372..296	385	100	Minus
3L	28110227	3L	27540860..27540936	296..372	385	100	Plus
3L	28110227	3L	27849949..27850025	296..372	385	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:46:45

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3R	31820162	3R	6496672..6497793	2451..1330	5610	100	Minus
3R	31820162	3R	6498304..6499265	1331..370	4810	100	Minus
3L	28103327	3L	27843163..27843836	370..1043	3310	99.4	Plus
3L	28103327	3L	27534074..27534747	370..1043	3310	99.4	Plus
3R	31820162	3R	6499938..6500233	296..1	1480	100	Minus
3L	28103327	3L	27533125..27533398	20..293	1310	98.5	Plus
3L	28103327	3L	27842214..27842487	20..293	1310	98.5	Plus
3R	31820162	3R	6499303..6499379	372..296	385	100	Minus
3L	28103327	3L	27843049..27843125	296..372	385	100	Plus
3L	28103327	3L	27533960..27534036	296..372	385	100	Plus

Blast to na_te.dros performed 2019-03-15 16:16:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6812..7013	912..1109	279	63.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6734..6849	912..1021	233	69.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6776..6888	912..1021	233	69.9	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6797..6921	912..1042	227	66.4	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6755..6892	912..1043	225	68.8	Plus
roo	9092	roo DM_ROO 9092bp	1040..1200	887..1042	197	62.3	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2367..2473	912..1021	183	64.5	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2343..2529	912..1103	182	60.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2409..2533	912..1036	166	59.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	6845..6977	912..1044	160	61.8	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2840..2947	911..1021	151	62.2	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2454..2581	912..1046	146	60.3	Plus
hopper	1435	hopper DMTRDNA 1435bp Derived from X80025 (g510507) (Rel. 44, Last updated, Version 11).	138..215	2336..2415	116	62.5	Plus

RE03232.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:17:44 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr3R	2581622..2582740	1332..2450	99	<-	Minus
chr3R	2583253..2583562	1022..1331	100	==	Minus
chr3R	2583673..2584211	373..911	100	<-	Minus
chr3R	2584252..2584327	297..372	100	<-	Minus
chr3R	2584887..2584935	248..296	100	==	Minus
chr3R	2585007..2585182	1..176	100		Minus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:47:27 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	1..1485	132..1616	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:32:09 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	1..1485	132..1616	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:58:57 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	1..1485	132..1616	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:15:59 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	1..1485	132..1616	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:32:35 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	1..1485	132..1616	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:37:13 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	76..2525	1..2450	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:32:09 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	76..2525	1..2450	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:58:57 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	65..2514	1..2450	100		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:15:59 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	76..2508	1..2433	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:32:35 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
bcd-RG	65..2514	1..2450	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:17:44 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	6759107..6759402	1..296	100		Minus
3R	6755842..6756960	1332..2450	100	<-	Minus
3R	6757473..6758431	373..1331	100	<-	Minus
3R	6758472..6758547	297..372	100	<-	Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:17:44 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	6759107..6759402	1..296	100		Minus
3R	6755842..6756960	1332..2450	100	<-	Minus
3R	6757473..6758431	373..1331	100	<-	Minus
3R	6758472..6758547	297..372	100	<-	Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:17:44 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	6759107..6759402	1..296	100		Minus
3R	6755842..6756960	1332..2450	100	<-	Minus
3R	6757473..6758431	373..1331	100	<-	Minus
3R	6758472..6758547	297..372	100	<-	Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:58:57 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_3R	2581564..2582682	1332..2450	100	<-	Minus
arm_3R	2583195..2584153	373..1331	100	<-	Minus
arm_3R	2584194..2584269	297..372	100	<-	Minus
arm_3R	2584829..2585124	1..296	100		Minus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:52:56 Download gff for RE03232.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3R	6496673..6497791	1332..2450	100	<-	Minus
3R	6498304..6499262	373..1331	100	<-	Minus
3R	6499303..6499378	297..372	100	<-	Minus
3R	6499938..6500233	1..296	100		Minus

RE03232.hyp Sequence

Translation from 131 to 1615

> RE03232.hyp
MAQPPPDQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQLQLPPQFR
NPFDLLFDERTGAINYNYIRPYLPNQMPKPDVFPSEELPDSLVMRRPRRT
RTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRR
RHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPS
PTPSTPTAHMTEHYSESFNAYYNYNGGHNHAQANRHMHMQYPSGGGPGPG
STNVNGGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQAQQQQYHHFDF
QQKQASACRVLVKDEPEADYNFNSSYYMRSGMSGATASASAVARGAASPG
SEVYEPLTPKNDESPSLCGIGIGGPCAIAVGETEAADDMDDGTSKKTTLQ
ILEPLKGLDKSCDDGSSDDMSTGIRALAGTGNRGAAFAKFGKPSPPQGPQ
PPLGMGGVAMGESNQYQCTMDTIMQAYNPHRNAAGNSQFAYCFN*

RE03232.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:19:29

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
bcd-PG	494	CG1034-PG	1..494	1..494	2716	100	Plus
bcd-PD	489	CG1034-PD	1..489	1..494	2673	99	Plus
bcd-PE	418	CG1034-PE	1..418	77..494	2248	100	Plus
bcd-PF	413	CG1034-PF	1..413	77..494	2205	98.8	Plus
bcd-PA	149	CG1034-PA	56..149	401..494	510	100	Plus

RE03232.pep Sequence

Translation from 131 to 1615

> RE03232.pep
MAQPPPDQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQLQLPPQFR
NPFDLLFDERTGAINYNYIRPYLPNQMPKPDVFPSEELPDSLVMRRPRRT
RTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRR
RHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPS
PTPSTPTAHMTEHYSESFNAYYNYNGGHNHAQANRHMHMQYPSGGGPGPG
STNVNGGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQAQQQQYHHFDF
QQKQASACRVLVKDEPEADYNFNSSYYMRSGMSGATASASAVARGAASPG
SEVYEPLTPKNDESPSLCGIGIGGPCAIAVGETEAADDMDDGTSKKTTLQ
ILEPLKGLDKSCDDGSSDDMSTGIRALAGTGNRGAAFAKFGKPSPPQGPQ
PPLGMGGVAMGESNQYQCTMDTIMQAYNPHRNAAGNSQFAYCFN*

RE03232.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:06:55

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF17793-PA	523	GF17793-PA	1..523	1..494	1653	79	Plus
Dana\GF17798-PA	790	GF17798-PA	197..261	97..161	171	46.2	Plus
Dana\GF23802-PA	532	GF23802-PA	442..506	89..153	163	44.6	Plus
Dana\GF18600-PA	384	GF18600-PA	176..248	94..166	157	39.7	Plus
Dana\GF17487-PA	728	GF17487-PA	375..445	95..165	154	39.4	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:06:57

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG10213-PA	495	GG10213-PA	1..495	1..494	2551	96.8	Plus
Dere\GG10269-PA	811	GG10269-PA	222..286	97..161	171	46.2	Plus
Dere\GG14457-PA	524	GG14457-PA	433..497	89..153	163	44.6	Plus
Dere\GG24598-PA	382	GG24598-PA	172..244	94..166	154	38.4	Plus
Dere\GG21608-PA	429	GG21608-PA	273..384	96..212	154	35	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:07:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH19480-PA	533	GH19480-PA	1..533	1..494	1239	65.1	Plus
Dgri\GH19484-PA	787	GH19484-PA	168..232	97..161	173	46.2	Plus
Dgri\GH14983-PA	559	GH14983-PA	460..524	89..153	162	44.6	Plus
Dgri\GH18130-PA	314	GH18130-PA	37..118	96..177	158	39	Plus
Dgri\GH13706-PA	752	GH13706-PA	402..472	95..165	158	40.8	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
bcd-PG	494	CG1034-PG	1..494	1..494	2716	100	Plus
bcd-PD	489	CG1034-PD	1..489	1..494	2673	99	Plus
bcd-PE	418	CG1034-PE	1..418	77..494	2248	100	Plus
bcd-PF	413	CG1034-PF	1..413	77..494	2205	98.8	Plus
bcd-PA	149	CG1034-PA	56..149	401..494	510	100	Plus
bcd-PA	149	CG1034-PA	1..62	1..62	358	90.3	Plus
Vsx1-PB	837	CG4136-PB	318..765	13..413	211	22.8	Plus
Vsx1-PA	837	CG4136-PA	318..765	13..413	211	22.8	Plus
eyg-PC	670	CG10488-PC	349..601	98..374	207	30.2	Plus
eyg-PB	670	CG10488-PB	349..601	98..374	207	30.2	Plus
eyg-PA	670	CG10488-PA	349..601	98..374	207	30.2	Plus
E5-PA	524	CG9930-PA	223..497	14..304	188	26.3	Plus
repo-PA	612	CG31240-PA	303..517	96..293	184	29.8	Plus
ftz-PA	410	CG2047-PA	255..408	98..296	171	29.9	Plus
pb-PD	772	CG31481-PD	188..311	97..208	167	34.7	Plus
pb-PC	777	CG31481-PC	193..316	97..208	167	34.7	Plus
pb-PB	777	CG31481-PB	193..316	97..208	167	34.7	Plus
pb-PA	782	CG31481-PA	198..321	97..208	167	34.7	Plus
lab-PB	213	CG1264-PB	89..204	101..211	164	39	Plus
lab-PA	629	CG1264-PA	505..620	101..211	164	39	Plus
Dll-PB	322	CG3629-PB	100..251	78..214	163	30.9	Plus
Dll-PA	327	CG3629-PA	100..251	78..214	163	30.9	Plus
Dll-PC	347	CG3629-PC	100..270	78..255	163	29.1	Plus
ro-PB	350	CG6348-PB	103..270	6..176	163	30.3	Plus
ro-PA	350	CG6348-PA	103..270	6..176	163	30.3	Plus
bsh-PC	429	CG10604-PC	273..384	96..212	158	34.2	Plus
bsh-PB	429	CG10604-PB	273..384	96..212	158	34.2	Plus
exex-PA	525	CG8254-PA	357..521	24..180	158	29.3	Plus
Vsx2-PA	640	CG33980-PA	137..284	12..151	157	32.5	Plus
Vsx2-PB	645	CG33980-PB	137..284	12..151	157	32.5	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:07:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI24718-PA	549	GI24718-PA	1..221	1..220	711	85	Plus
Dmoj\GI24721-PA	773	GI24721-PA	176..240	97..161	173	46.2	Plus
Dmoj\GI13145-PA	551	GI13145-PA	454..518	89..153	161	44.6	Plus
Dmoj\GI22889-PA	234	GI22889-PA	31..96	93..158	157	45.5	Plus
Dmoj\GI13996-PA	278	GI13996-PA	19..85	93..159	155	43.3	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:07:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\bcd-PA	426	GL22043-PA	1..426	1..494	1002	59.1	Plus
Dper\GL22046-PA	797	GL22046-PA	190..254	97..161	172	46.2	Plus
Dper\GL21778-PA	471	GL21778-PA	291..355	98..168	157	43.7	Plus
Dper\GL18045-PA	593	GL18045-PA	485..545	93..153	156	44.3	Plus
Dper\GL27337-PA	380	GL27337-PA	178..246	90..155	154	42	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:07:07

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\bcd-PA	536	GA10255-PA	1..536	1..494	1451	68	Plus
Dpse\bcd-PC	463	GA10255-PC	1..463	77..494	1285	67.1	Plus
Dpse\bcd-PB	140	GA10255-PB	57..140	405..494	309	71.1	Plus
Dpse\pb-PA	801	GA16277-PA	190..254	97..161	172	46.2	Plus
Dpse\pb-PB	796	GA16277-PB	185..249	97..161	172	46.2	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:07:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\bcd-PA	484	GM10525-PA	1..484	1..494	2505	96.2	Plus
Dsec\GM10530-PA	833	GM10530-PA	245..309	97..161	172	46.2	Plus
Dsec\GM25007-PA	523	GM25007-PA	435..495	93..153	163	45.9	Plus
Dsec\GM16987-PA	429	GM16987-PA	273..384	96..212	153	35	Plus
Dsec\ftz-PA	413	GM10917-PA	258..346	98..192	152	36.8	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:07:10

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\bcd-PA	489	GD19520-PA	1..489	1..494	2562	97.6	Plus
Dsim\GD19525-PA	789	GD19525-PA	201..265	97..161	172	46.2	Plus
Dsim\GD14043-PA	321	GD14043-PA	228..292	89..153	159	44.6	Plus
Dsim\GD21734-PA	429	GD21734-PA	273..384	96..212	153	35	Plus
Dsim\ftz-PA	413	GD19897-PA	258..346	98..192	152	36.8	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:07:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\bcd-PA	561	GJ23934-PA	1..561	1..494	1236	61.4	Plus
Dvir\GJ23937-PA	780	GJ23937-PA	173..237	97..161	172	46.2	Plus
Dvir\GJ13893-PA	557	GJ13893-PA	461..525	89..153	162	44.6	Plus
Dvir\GJ14677-PA	442	GJ14677-PA	285..366	96..175	156	41	Plus
Dvir\GJ23303-PA	322	GJ23303-PA	43..109	93..159	155	43.3	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:07:15

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK10828-PA	502	GK10828-PA	1..210	1..246	650	66	Plus
Dwil\GK12250-PA	233	GK12250-PA	16..96	73..153	177	43.2	Plus
Dwil\GK10831-PA	816	GK10831-PA	197..261	97..161	172	46.2	Plus
Dwil\GK20585-PA	578	GK20585-PA	482..542	93..153	161	45.9	Plus
Dwil\GK18982-PA	233	GK18982-PA	105..165	95..155	148	45.9	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:07:17

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE25828-PA	490	GE25828-PA	1..490	1..494	1884	94.2	Plus
Dyak\GE25834-PA	784	GE25834-PA	193..257	97..161	171	46.2	Plus
Dyak\GE21647-PA	532	GE21647-PA	443..503	93..153	164	45.9	Plus
Dyak\GE26456-PA	721	GE26456-PA	391..461	95..165	157	40.8	Plus
Dyak\GE12629-PA	428	GE12629-PA	272..331	96..155	152	45	Plus

Library:	RE
Tissue Source:	Drosophila melanogaster embryo
Created by:	Piero Carninci, RIKEN Genome Science Laboratory
Date Registered:	2000-10-23
Comments:	Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI
Original Plate Number:	32
Well:	32
Vector:	pFlc-1
Associated Gene/Transcript	bcd-RG
Protein status:	RE03232.pep: gold
Sequenced Size:	2461

Clone RE03232 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

RE03232.complete Sequence

RE03232.complete Blast Records

RE03232.complete Sim4 Records

RE03232.hyp Sequence

RE03232.hyp Blast Records

RE03232.pep Sequence

RE03232.pep Blast Records