BDGP Sequence Production Resources |
Search the DGRC for RE03769
Library: | RE |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Piero Carninci, RIKEN Genome Science Laboratory |
Date Registered: | 2000-10-23 |
Comments: | Average reported size from P Carninci is 2.3kb. Directionally cloned:5 end at XhoI, 3 end at BamHI |
Original Plate Number: | 37 |
Well: | 69 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG7271-RA |
Protein status: | RE03769.pep: gold |
Sequenced Size: | 1416 |
Gene | Date | Evidence |
---|---|---|
CG7271 | 2008-04-29 | Release 5.5 accounting |
CG7271 | 2008-04-29 | Picked prior to 5.5 |
CG7271 | 2008-08-15 | Release 5.9 accounting |
CG7271 | 2008-12-18 | 5.12 accounting |
1416 bp assembled on 2007-08-16
GenBank Submission: BT031007
> RE03769.complete AGTCAGCAACTGAACCTTGTCATAGACACATCTCAGTGCTTCAGAGCTAT ATCCACCTTCAGTTTTCGAATCCAAAGTTTCCATATCTCAATCATGTTCG ACGAGCCCATATCCAGCTTCGTTTTTACCGACGAAGAGACCACGCAGACA TTCCACCACCAGTGGTTTTCCCAGGGCCAGTTACACGAATGTGCCACCTG CTACAGCTCCATCGACGCAGATGAGCCGCCCTCCCAGCATTGGCTGCGGG GAGGAGAAGCATCACAGGGCTTGCATCTTACCAAGCAACAGCAGGCCGTT ATGGATATTATCGAGGCCCGCCAGATCGAGACTTTCTTTTTCTGCGACGA GAGTTCCAAGGACAAGCTGGAACACTTCATGGGCGAGACCTGTGCGAGGG GAATCCCCGAGCTTCTCCGCTGGATGTTCCAGAACAACACCGTGGCCGTG GAGTTCAATTTGGCCTGCTACGTGAACGCCATGGACCAGGTGTTGATCTT TCAGAGCGGCTCGCTGAGGGTGGACCACCACTACGACGTAGACGAATCCG TGGGCGTGGTCTACGAGATGCTTATGCAGAGGATCGAAAACTACCTCAAC TGCAGCAGCGAGTACGGCATGGCAGAGTGCAGCATCACCAGATTGAAAGT ACAGGTGAAGAGGATTAGGGTGGAGGCGGACGGTCAGTCAGCGGACTCGT CCGTCTTCGCCCTACCCCTGCAGCTTCAGGAGGAGGAGGGCCTGACCGCC ACTACCGGCTGCTCCACCAGCGAGGCAGAGCTTGCCAGTCTGCGCTCCGC CTACCTGAAGCACTTCCGCGAGTGCAACGGCAACTTCCCGCCCAACATGC GCGTCAATCTCTACGGACTGCAGCAGTGCAAGACCACCAAGGAGCTGTAT GTGGTGCCCTATCATATCAGCGAAACCCTCCAGCAGCTGCCCAACAAGAA CTTCCTCATCCTGAACAATATCATGGGCCAATTCCAGCGGCTCCACGAGC TCTCCACCCCCGTCAATTCCATCGAAAGGGATCAGACCAGCTCGCCGCTA AAGGACCTCCACTGCCGGAGGTGTCGCACCCAGTTCTCGCGACGCAGCAA ACTGCACATCCACCAGAAGCTGCGCTGTGGCCAGGACTTCTCCGTGGACA GCATGCACGCGGACATCGTGGAGATCTACGAGCAGTGCCTGCCCATCTCG AGAAGCGTCTTCCAGCACGCCTGCTACGGCATCACCAAGCCCAAGACCAT GATGCGGAAGGGTCAGTTTGTGCCCATCGAGTGCGACTGGCGCAGCGAGA GCTCCGTGAAGGTGCAGCACGGCCCGTGTGTCGTCATCAGCAACGCCCAG CACAATAGTCCTTTTAAATTTTATTAAATAAACGATAACTTTTAAGCACC CAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 18581866..18583265 | 1..1400 | 7000 | 100 | Plus |
3L | 28103327 | 3L | 18585405..18586760 | 1397..45 | 6575 | 99.1 | Minus |
3L | 28103327 | 3L | 18586821..18586860 | 42..3 | 155 | 92.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 18578401..18579800 | 1..1401 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 1..1284 | 94..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 1..1284 | 94..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 1..1284 | 94..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 1..1284 | 94..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 1..1284 | 94..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 4..1403 | 1..1400 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 4..1403 | 1..1400 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 8..1407 | 1..1400 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 4..1381 | 1..1378 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7271-RA | 8..1407 | 1..1400 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18588766..18590165 | 1..1401 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18588766..18590165 | 1..1401 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18588766..18590165 | 1..1401 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 18581866..18583265 | 1..1401 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18581866..18583265 | 1..1401 | 99 | Plus |
Translation from 0 to 1376
> RE03769.hyp SQQLNLVIDTSQCFRAISTFSFRIQSFHISIMFDEPISSFVFTDEETTQT FHHQWFSQGQLHECATCYSSIDADEPPSQHWLRGGEASQGLHLTKQQQAV MDIIEARQIETFFFCDESSKDKLEHFMGETCARGIPELLRWMFQNNTVAV EFNLACYVNAMDQVLIFQSGSLRVDHHYDVDESVGVVYEMLMQRIENYLN CSSEYGMAECSITRLKVQVKRIRVEADGQSADSSVFALPLQLQEEEGLTA TTGCSTSEAELASLRSAYLKHFRECNGNFPPNMRVNLYGLQQCKTTKELY VVPYHISETLQQLPNKNFLILNNIMGQFQRLHELSTPVNSIERDQTSSPL KDLHCRRCRTQFSRRSKLHIHQKLRCGQDFSVDSMHADIVEIYEQCLPIS RSVFQHACYGITKPKTMMRKGQFVPIECDWRSESSVKVQHGPCVVISNAQ HNSPFKFY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7271-PA | 427 | CG7271-PA | 1..427 | 32..458 | 2277 | 100 | Plus |
term-PA | 428 | CG4216-PA | 1..428 | 32..458 | 2240 | 98.8 | Plus |
CG6885-PA | 378 | CG6885-PA | 7..377 | 38..415 | 470 | 27.9 | Plus |
Translation from 93 to 1376
> RE03769.pep MFDEPISSFVFTDEETTQTFHHQWFSQGQLHECATCYSSIDADEPPSQHW LRGGEASQGLHLTKQQQAVMDIIEARQIETFFFCDESSKDKLEHFMGETC ARGIPELLRWMFQNNTVAVEFNLACYVNAMDQVLIFQSGSLRVDHHYDVD ESVGVVYEMLMQRIENYLNCSSEYGMAECSITRLKVQVKRIRVEADGQSA DSSVFALPLQLQEEEGLTATTGCSTSEAELASLRSAYLKHFRECNGNFPP NMRVNLYGLQQCKTTKELYVVPYHISETLQQLPNKNFLILNNIMGQFQRL HELSTPVNSIERDQTSSPLKDLHCRRCRTQFSRRSKLHIHQKLRCGQDFS VDSMHADIVEIYEQCLPISRSVFQHACYGITKPKTMMRKGQFVPIECDWR SESSVKVQHGPCVVISNAQHNSPFKFY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23638-PA | 368 | GF23638-PA | 7..368 | 7..385 | 500 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15737-PA | 427 | GG15737-PA | 1..427 | 1..427 | 2228 | 95.3 | Plus |
Dere\GG13660-PA | 427 | GG13660-PA | 1..427 | 1..427 | 2228 | 95.3 | Plus |
Dere\GG13674-PA | 374 | GG13674-PA | 7..374 | 7..385 | 492 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11100-PA | 425 | GH11100-PA | 7..425 | 3..425 | 1505 | 68.2 | Plus |
Dgri\GH14371-PA | 359 | GH14371-PA | 7..356 | 7..380 | 526 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7271-PA | 427 | CG7271-PA | 1..427 | 1..427 | 2277 | 100 | Plus |
term-PA | 428 | CG4216-PA | 1..428 | 1..427 | 2240 | 98.8 | Plus |
CG6885-PA | 378 | CG6885-PA | 7..377 | 7..384 | 470 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13592-PA | 419 | GI13592-PA | 2..418 | 4..426 | 1437 | 67.9 | Plus |
Dmoj\GI11314-PA | 369 | GI11314-PA | 7..367 | 7..380 | 499 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22878-PA | 437 | GL22878-PA | 9..436 | 3..426 | 1837 | 78.4 | Plus |
Dper\GL24879-PA | 235 | GL24879-PA | 3..234 | 143..386 | 305 | 30.2 | Plus |
Dper\GL20453-PA | 139 | GL20453-PA | 1..128 | 1..125 | 158 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20226-PA | 437 | GA20226-PA | 9..436 | 3..426 | 1839 | 78.6 | Plus |
Dpse\GA19930-PA | 376 | GA19930-PA | 1..375 | 1..386 | 471 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14975-PA | 427 | GM14975-PA | 1..427 | 1..427 | 2228 | 96 | Plus |
Dsec\GM14935-PA | 427 | GM14935-PA | 1..427 | 1..427 | 2151 | 93.4 | Plus |
Dsec\GM14989-PA | 378 | GM14989-PA | 7..377 | 7..384 | 483 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14752-PA | 427 | GD14752-PA | 1..427 | 1..427 | 2233 | 96.3 | Plus |
Dsim\GD12340-PA | 134 | GD12340-PA | 1..134 | 294..427 | 680 | 91.8 | Plus |
Dsim\GD12339-PA | 134 | GD12339-PA | 1..118 | 1..118 | 626 | 96.6 | Plus |
Dsim\GD14766-PA | 378 | GD14766-PA | 7..377 | 7..384 | 497 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13931-PA | 421 | GJ13931-PA | 4..420 | 3..426 | 1572 | 68.6 | Plus |
Dvir\GJ11571-PA | 367 | GJ11571-PA | 7..365 | 7..380 | 559 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11209-PA | 434 | GK11209-PA | 1..434 | 1..427 | 1693 | 74 | Plus |
Dwil\GK12077-PA | 382 | GK12077-PA | 8..378 | 7..380 | 462 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22069-PA | 423 | GE22069-PA | 1..423 | 1..427 | 2217 | 95.6 | Plus |
Dyak\GE19957-PA | 338 | GE19957-PA | 1..256 | 1..262 | 1158 | 84 | Plus |
Dyak\GE19957-PA | 338 | GE19957-PA | 206..338 | 296..427 | 620 | 87.2 | Plus |
Dyak\GE19971-PA | 378 | GE19971-PA | 7..374 | 7..381 | 484 | 28.4 | Plus |